RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 H3BM21 787 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 GRID2O43424 1007 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 NUAK1O60285 661 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 FAM155BO75949 473 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 HAUS5O94927 633 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 S1PR4O95977 384 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 FTH1P02794 183 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 SHBGP04278 402 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 INHBAP08476 426 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 OR56A5P0C7T3 313 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 GPR89BP0CG08 455 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 FMO4P31512 558 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 NBL1P41271 181 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 LEPRP48357 1165 aaKnown RBP13.38□□□□□ -0.27
CPNE1-227ENST00000498056 PRLHRP49683 370 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 CSE1LP55060 971 aaKnown RBP13.38□□□□□ -0.27
CPNE1-227ENST00000498056 IFFO1Q0D2I5 559 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 EIF2B5Q13144 721 aaKnown RBP13.38□□□□□ -0.27
CPNE1-227ENST00000498056 KIF19Q2TAC6 998 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 SYTL3Q4VX76 610 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 CTSL3PQ5NE16 218 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 RBM20Q5T481 1227 aaKnown RBP13.38□□□□□ -0.27
CPNE1-227ENST00000498056 FBXO38Q6PIJ6 1188 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 TMEM220Q6QAJ8 160 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 KRT222Q8N1A0 295 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 LKAAEAR1Q8TD35 194 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 SCG3Q8WXD2 468 aaKnown RBP13.38□□□□□ -0.27
CPNE1-227ENST00000498056 FAM136AQ96C01 138 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 SGF29Q96ES7 293 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 VPS39Q96JC1 886 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 ELMO2Q96JJ3 720 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 RBBP8Q99708 897 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 GTPBP2Q9BX10 602 aaKnown RBP13.38□□□□□ -0.27
CPNE1-227ENST00000498056 TSSK1BQ9BXA7 367 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 NUSAP1Q9BXS6 441 aaKnown RBP13.38□□□□□ -0.27
CPNE1-227ENST00000498056 FUT8Q9BYC5 575 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 P2RY12Q9H244 342 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 TCEAL2Q9H3H9 227 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-227ENST00000498056 CAAP1Q9H8G2 361 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 RMI1Q9H9A7 625 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 ZNHIT2Q9UHR6 403 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 PNMA8BQ9ULN7 279 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-227ENST00000498056 SLC6A14Q9UN76 642 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 GPSM3Q9Y4H4 160 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 PCDHB1Q9Y5F3 818 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 GPR179Q6PRD1 2367 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 IQCF5A8MTL0 148 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 E5RI56 91 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 QSOX1O00391 747 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 TNFRSF10CO14798 259 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 SDC3O75056 442 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 DNAJC6O75061 913 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 NIPSNAP2O75323 286 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 AP2A2O94973 939 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 LMNAP02545 664 aaKnown RBP13.37□□□□□ -0.27
CPNE1-227ENST00000498056 ESR1P03372 595 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 RETP07949 1114 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 PKMP14618 531 aaKnown RBP13.37□□□□□ -0.27
CPNE1-227ENST00000498056 NME1P15531 152 aaKnown RBP13.37□□□□□ -0.27
CPNE1-227ENST00000498056 JUNDP17535 347 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 SAT1P21673 171 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 RPS3P23396 243 aaKnown RBP eCLIP13.37□□□□□ -0.272e-8■□□□□ 10.1
CPNE1-227ENST00000498056 GABRB3P28472 473 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 CTSKP43235 329 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 HK3P52790 923 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 IL9RQ01113 521 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 BNC1Q01954 994 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 BMPR2Q13873 1038 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 BOP1Q14137 746 aaKnown RBP13.37□□□□□ -0.27
CPNE1-227ENST00000498056 BCL7AQ4VC05 210 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 PRAMEF14Q5SWL7 426 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 SLC23A3Q6PIS1 610 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 CYS1Q717R9 158 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 TAOK1Q7L7X3 1001 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 CHST15Q7LFX5 561 aaPredicted RBP13.37□□□□□ -0.27
CPNE1-227ENST00000498056 GALNT7Q86SF2 657 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 ZC3HC1Q86WB0 502 aaKnown RBP13.37□□□□□ -0.27
CPNE1-227ENST00000498056 OXR1Q8N573 874 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 OR2W6PQ8NHA6 318 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 EPS8L3Q8TE67 593 aaKnown RBP13.37□□□□□ -0.27
CPNE1-227ENST00000498056 CCDC77Q9BR77 488 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 SLC13A1Q9BZW2 595 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 OSGEPL1Q9H4B0 414 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 RHOJQ9H4E5 214 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 CAPN10Q9HC96 672 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 SARS2Q9NP81 518 aaKnown RBP13.37□□□□□ -0.27
CPNE1-227ENST00000498056 CORO1CQ9ULV4 474 aaPredicted RBP13.37□□□□□ -0.27
CPNE1-227ENST00000498056 KCNK6Q9Y257 313 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 PLAAQ9Y263 795 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 DNAJC16Q9Y2G8 782 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 CABIN1Q9Y6J0 2220 aa13.37□□□□□ -0.27
CPNE1-227ENST00000498056 OTOGLQ3ZCN5 2332 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 FAM95CA0A1B0GW59 222 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 H3BMM5 538 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 KHNYNO15037 678 aaKnown RBP13.36□□□□□ -0.27
CPNE1-227ENST00000498056 CHUKO15111 745 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 KMOO15229 486 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 TRIM16O95361 564 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 CER1O95813 267 aa13.36□□□□□ -0.27
CPNE1-227ENST00000498056 TNFP01375 233 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms