RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 SPC24Q8NBT2 197 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 ATAD1Q8NBU5 361 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 C9orf43Q8TAL5 461 aaPredicted RBP2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 SPATA20Q8TB22 786 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 DENND1AQ8TEH3 1009 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 ZFAND2BQ8WV99 257 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 ZFPM2Q8WW38 1151 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 AKAP1Q92667 903 aaKnown RBP eCLIP2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 EXOC4Q96A65 974 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 HDAC11Q96DB2 347 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 MYEOVQ96EZ4 313 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 SAT2Q96F10 170 aaPredicted RBP2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 SPXQ9BT56 116 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 CADM1Q9BY67 442 aaKnown RBP2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 FRMD8Q9BZ67 464 aaPredicted RBP2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 TRIM31Q9BZY9 425 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 FTOQ9C0B1 505 aaKnown RBP eCLIP2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 NUAK2Q9H093 628 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 KLC2Q9H0B6 622 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 MMP27Q9H306 513 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 HRH4Q9H3N8 390 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 TSPY26PQ9H489 355 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 PRORYQ9H606 182 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 ZNF703Q9H7S9 590 aaPredicted RBP2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 DNAJC18Q9H819 358 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 PIH1D3Q9NQM4 214 aaKnown RBP2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 SLC6A13Q9NSD5 602 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 SNTG1Q9NSN8 517 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 SERTAD4Q9NUC0 356 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 PDRG1Q9NUG6 133 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 OLAHQ9NV23 265 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 PCMTD2Q9NV79 361 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 SETD4Q9NVD3 440 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 AURKAIP1Q9NWT8 199 aaPredicted RBP2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 EHD3Q9NZN3 535 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 COPG2Q9UBF2 871 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 MGAT4CQ9UBM8 478 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 APPL1Q9UKG1 709 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 MKLN1Q9UL63 735 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 PTRH2Q9Y3E5 179 aaKnown RBP2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 CMAHPQ9Y471 501 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 NUP98P52948 1817 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 RALGAPA1Q6GYQ0 2036 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 MED23Q9ULK4 1368 aa2.49□□□□□ -2.01
CKS1BP2-201ENST00000497342 RYR3Q15413 4870 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 ARAP2Q8WZ64 1704 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 SALL3Q9BXA9 1300 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 ACANP16112 2415 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 COL5A1P20908 1838 aaPredicted RBP2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 TRGV11A0A075B6L2 103 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 A0A0U1RQF3 1178 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 FAM237AA0A1B0GTK4 181 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 A4D1N5 150 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 CLEC18AA5D8T8 446 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 OOEPA6NGQ2 149 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 SLC15A5A6NIM6 579 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 OR6C76A6NM76 312 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 A8MV72 311 aaPredicted RBP2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 MAGEB17A8MXT2 336 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 TTC34A8MYJ7 566 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 VWC2LB2RUY7 222 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 H0YAE9 185 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 ETV2O00321 342 aaPredicted RBP2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 RTCAO00442 366 aaKnown RBP2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 CPLX1O14810 134 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 SUV39H1O43463 412 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 LAMTOR5O43504 91 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 SLC25A12O75746 678 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 CDKL5O76039 1030 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 DDHD2O94830 711 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 PEX11BO96011 259 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 MT-CYBP00156 380 aaPredicted RBP2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 ENO1P06733 434 aaKnown RBP2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 DCNP07585 359 aaKnown RBP2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 ALDOCP09972 364 aaKnown RBP2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 SUPT20HL2P0C7V6 817 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 CEACAM1P13688 526 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 PRLRP16471 622 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 PI3P19957 117 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 CSE1LP55060 971 aaKnown RBP2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 TPTEP56180 551 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 WDR5P61964 334 aaKnown RBP2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 YPEL5P62699 121 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 SIRPAP78324 504 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 BLOC1S1P78537 153 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 MRPS34P82930 218 aaKnown RBP2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 E2F1Q01094 437 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 SLC18A2Q05940 514 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 ACTN3Q08043 901 aaPredicted RBP2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 ACSM2AQ08AH3 577 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 C17orf67Q0P5P2 114 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 AP1B1Q10567 949 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 TOB2Q14106 344 aaPredicted RBP2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 KCNB1Q14721 858 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 RABEP1Q15276 862 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 KCNA10Q16322 511 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 LPAL2Q16609 132 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 AP5B1Q2VPB7 878 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 TBC1D25Q3MII6 688 aa2.48□□□□□ -2.01
CKS1BP2-201ENST00000497342 FUT11Q495W5 492 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms