RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 GPR179Q6PRD1 2367 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 A0A087WUV0 522 aaPredicted RBP18.09■□□□□ 0.49
TSSC4-210ENST00000496468 CHUKO15111 745 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 SCAMP1O15126 338 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 YKT6O15498 198 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 CTIFO43310 598 aaKnown RBP18.09■□□□□ 0.49
TSSC4-210ENST00000496468 RPS3P23396 243 aaKnown RBP eCLIP18.09■□□□□ 0.493e-7■■■■■ 39.2
TSSC4-210ENST00000496468 CD151P48509 253 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 PRLHRP49683 370 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 CCT8P50990 548 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 HNRNPKP61978 463 aaKnown RBP eCLIP18.09■□□□□ 0.49
TSSC4-210ENST00000496468 SF3A2Q15428 464 aaKnown RBP18.09■□□□□ 0.49
TSSC4-210ENST00000496468 CSRP2Q16527 193 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 HLA-BQ31612 363 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 PYCR3Q53H96 274 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 CLDN19Q8N6F1 224 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 LRRC61Q9BV99 259 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 FUT8Q9BYC5 575 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 TCEAL2Q9H3H9 227 aaPredicted RBP18.09■□□□□ 0.49
TSSC4-210ENST00000496468 ACSS3Q9H6R3 686 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 GAREM1Q9H706 876 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 SMYD2Q9NRG4 433 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 ZNHIT2Q9UHR6 403 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 KLF15Q9UIH9 416 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 PRKAB1Q9Y478 270 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 GPSM3Q9Y4H4 160 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 PCDHB1Q9Y5F3 818 aa18.09■□□□□ 0.49
TSSC4-210ENST00000496468 PCYT1BQ9Y5K3 369 aaPredicted RBP18.09■□□□□ 0.49
TSSC4-210ENST00000496468 CXorf49A8MYA2 514 aaPredicted RBP18.08■□□□□ 0.48
TSSC4-210ENST00000496468 KMOO15229 486 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 DFNA5O60443 496 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 ERLIN1O75477 346 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 PIAS1O75925 651 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 S1PR4O95977 384 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 C1QAP02745 245 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 ESR1P03372 595 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 OR56A5P0C7T3 313 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 ACP5P13686 325 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 CTSEP14091 401 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 EPHA8P29322 1005 aaPredicted RBP18.08■□□□□ 0.48
TSSC4-210ENST00000496468 PBLDP30039 288 aaPredicted RBP18.08■□□□□ 0.48
TSSC4-210ENST00000496468 LEPRP48357 1165 aaKnown RBP18.08■□□□□ 0.48
TSSC4-210ENST00000496468 ADARP55265 1226 aaKnown RBP18.08■□□□□ 0.48
TSSC4-210ENST00000496468 IL9RQ01113 521 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 TCEA2Q15560 299 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 INSCQ1MX18 579 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 KLHL38Q2WGJ6 581 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 PRRT3Q5FWE3 981 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 ZNF789Q5FWF6 425 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 PRAMEF14Q5SWL7 426 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 PTRHD1Q6GMV3 140 aaKnown RBP18.08■□□□□ 0.48
TSSC4-210ENST00000496468 TMEM220Q6QAJ8 160 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 STRA8Q7Z7C7 330 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 ZNF547Q8IVP9 402 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 MINDY1Q8N5J2 469 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 PPM1NQ8N819 430 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 ZNF548Q8NEK5 533 aaPredicted RBP18.08■□□□□ 0.48
TSSC4-210ENST00000496468 UHMK1Q8TAS1 419 aaKnown RBP18.08■□□□□ 0.48
TSSC4-210ENST00000496468 SGF29Q96ES7 293 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 CYTH2Q99418 400 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 TIMM29Q9BSF4 260 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 EDEM2Q9BV94 578 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 TSSK1BQ9BXA7 367 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 P2RY12Q9H244 342 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 CCDC68Q9H2F9 335 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 GPR34Q9UPC5 381 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 CRYL1Q9Y2S2 319 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 PSAT1Q9Y617 370 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 PRSS21Q9Y6M0 314 aa18.08■□□□□ 0.48
TSSC4-210ENST00000496468 A0A1B0GTQ1 180 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 H3BMM5 538 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 SGTAO43765 313 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 SDC3O75056 442 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 FTH1P02794 183 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 FUCA1P04066 466 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 ABCG1P45844 678 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 ILF3Q12906 894 aaKnown RBP eCLIP18.07■□□□□ 0.48
TSSC4-210ENST00000496468 LRP8Q14114 963 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 AASDHQ4L235 1098 aaPredicted RBP18.07■□□□□ 0.48
TSSC4-210ENST00000496468 CTSL3PQ5NE16 218 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 PRR23CQ6ZRP0 262 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 CHST15Q7LFX5 561 aaPredicted RBP18.07■□□□□ 0.48
TSSC4-210ENST00000496468 ASCL5Q7RTU5 278 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 BEND7Q8N7W2 519 aaPredicted RBP18.07■□□□□ 0.48
TSSC4-210ENST00000496468 OR2I1PQ8NGU4 316 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 CPNE1Q99829 537 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 TMEM168Q9H0V1 697 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 EPB41L4BQ9H329 900 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 IL21RQ9HBE5 538 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 PARD6AQ9NPB6 346 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 TRNAU1APQ9NX07 287 aaKnown RBP18.07■□□□□ 0.48
TSSC4-210ENST00000496468 SPASTQ9UBP0 616 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 RABGEF1Q9UJ41 708 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 CORO1CQ9ULV4 474 aaPredicted RBP18.07■□□□□ 0.48
TSSC4-210ENST00000496468 FRYLO94915 3013 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 LAMA1P25391 3075 aa18.07■□□□□ 0.48
TSSC4-210ENST00000496468 EXOC1LA0A1B0GW35 172 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 CCDC151A5D8V7 595 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 FOXD2O60548 495 aaPredicted RBP18.06■□□□□ 0.48
TSSC4-210ENST00000496468 PIAS2O75928 621 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms