RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 C3orf18Q9UK00 162 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 GMEB2Q9UKD1 530 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 TMPRSS11EQ9UL52 423 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ZBTB21Q9ULJ3 1066 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 STUB1Q9UNE7 303 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 AP4E1Q9UPM8 1137 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 BTBD3Q9Y2F9 522 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 TNPO3Q9Y5L0 923 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 A0A087X1B8 175 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 LOC100130705A0A1B0GUX0 176 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 RPS10-NUDT3A0A1W2PQS6 291 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 ERI2A8K979 691 aaKnown RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 H0YIN7 160 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 PITPNM1O00562 1244 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 ZBTB39O15060 712 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 WISP3O95389 354 aaPredicted RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 ITGBL1O95965 494 aaPredicted RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 PSKH1P11801 424 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 TFE3P19532 575 aaPredicted RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 ATP5F1P24539 256 aaPredicted RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 PTBP1P26599 531 aaKnown RBP eCLIP4.75□□□□□ -1.652e-7■■■□□ 17.7
PRKD3-210ENST00000494667 NPY2RP49146 381 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 HOXA1P49639 335 aaPredicted RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 LIG4P49917 911 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 SERPINH1P50454 418 aaKnown RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 GBX2P52951 348 aaPredicted RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 PTPN20Q4JDL3 420 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 PYCR3Q53H96 274 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 GNASQ5JWF2 1037 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 DENND5AQ6IQ26 1287 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 USP50Q70EL3 339 aaPredicted RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 B3GNT8Q7Z7M8 397 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 RNF130Q86XS8 419 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 IFNL1Q8IU54 200 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 PLD3Q8IV08 490 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 CHPFQ8IZ52 775 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 CENPLQ8N0S6 344 aaPredicted RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 DUSP18Q8NEJ0 188 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 WDR48Q8TAF3 677 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 TMBIM1Q969X1 311 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 BIRC7Q96CA5 298 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 INTS12Q96CB8 462 aaKnown RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 NSMCE2Q96MF7 247 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 NUAK2Q9H093 628 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 CD93Q9NPY3 652 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 ZNF358Q9NW07 568 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 CUEDC1Q9NWM3 386 aaPredicted RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 MARK1Q9P0L2 795 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 TMEFF2Q9UIK5 374 aaPredicted RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 V9GYH0 126 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 OTOFQ9HC10 1997 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 ATP6AP2A0A1C7CYW4 349 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 IFRD1O00458 451 aaPredicted RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 NEMP1O14524 444 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 NCAM2O15394 837 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 DHX15O43143 795 aaKnown RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 PLA2G6O60733 806 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 PAPSS2O95340 614 aaPredicted RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 STAU1O95793 577 aaKnown RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 FAM157BP0CG42 384 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 ADORA3P0DMS8 318 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 TCF3P15923 654 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 KLRK1P26718 216 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 SCNN1AP37088 669 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 IL12RB1P42701 662 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 PER3P56645 1201 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 DYNLT1P63172 113 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 RCAN2Q14206 197 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 IRF3Q14653 427 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 DPYSL2Q16555 572 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 MEP1AQ16819 746 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 CYP51A1Q16850 503 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 BCL7AQ4VC05 210 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 TMEM270Q6UE05 265 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 SLC26A9Q7LBE3 791 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 OVCH2Q7RTZ1 564 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 SNX20Q7Z614 316 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 GHDCQ8N2G8 530 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 C9orf62Q8N4C0 152 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 CCNYL1Q8N7R7 359 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 OR52H1Q8NGJ2 320 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 OR5K1Q8NHB7 308 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 JOSD2Q8TAC2 188 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 ADAM32Q8TC27 787 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 BTN2A2Q8WVV5 523 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 OMA1Q96E52 524 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 C11orf84Q9BUA3 381 aaPredicted RBP4.75□□□□□ -1.65
PRKD3-210ENST00000494667 BRINP2Q9C0B6 783 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 MCOLN1Q9GZU1 580 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 SLC22A4Q9H015 551 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 SHARPINQ9H0F6 387 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 RHOJQ9H4E5 214 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 ALG2Q9H553 416 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 CASS4Q9NQ75 786 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 TMEM39AQ9NV64 488 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 PHF11Q9UIL8 331 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 PRELID3BQ9Y3B1 194 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 CACNG2Q9Y698 323 aa4.75□□□□□ -1.65
PRKD3-210ENST00000494667 USP3Q9Y6I4 520 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms