RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 LURAP1LQ8IV03 231 aa10.91□□□□□ -0.66
TMEM39A-211ENST00000491685 KLHL7Q8IXQ5 586 aa10.91□□□□□ -0.66
TMEM39A-211ENST00000491685 DNAAF3Q8N9W5 541 aa10.91□□□□□ -0.66
TMEM39A-211ENST00000491685 TADA1Q96BN2 335 aa10.91□□□□□ -0.66
TMEM39A-211ENST00000491685 CCDC74BQ96LY2 380 aa10.91□□□□□ -0.66
TMEM39A-211ENST00000491685 GPR63Q9BZJ6 419 aa10.91□□□□□ -0.66
TMEM39A-211ENST00000491685 ETNK1Q9HBU6 452 aa10.91□□□□□ -0.66
TMEM39A-211ENST00000491685 TRNAU1APQ9NX07 287 aaKnown RBP10.91□□□□□ -0.66
TMEM39A-211ENST00000491685 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.91□□□□□ -0.663e-7■■□□□ 12.9
TMEM39A-211ENST00000491685 PCYOX1Q9UHG3 505 aa10.91□□□□□ -0.66
TMEM39A-211ENST00000491685 OAS3Q9Y6K5 1087 aaKnown RBP10.91□□□□□ -0.66
TMEM39A-211ENST00000491685 COL12A1Q99715 3063 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 IGHV5-10-1A0A0J9YXX1 117 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 RGSL1A5PLK6 1076 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 C2orf81A6NN90 581 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 RHPN2P1A8MT19 583 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 NVLO15381 856 aaKnown RBP10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 METTL18O95568 372 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 CRTAMO95727 393 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 CPNE6O95741 557 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 AGTP01019 485 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 PSMB4P28070 264 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 ALDH4A1P30038 563 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 ACTR1BP42025 376 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 STC1P52823 247 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 GDF10P55107 478 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 ACTR1AP61163 376 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 BASP1P80723 227 aaKnown RBP10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 DR1Q01658 176 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 SLC1A5Q15758 541 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 QPCTQ16769 361 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 PYCR3Q53H96 274 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 ADAMTSL4Q6UY14 1074 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 RANBP10Q6VN20 620 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 SLC25A41Q8N5S1 370 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 CEP112Q8N8E3 955 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 EXD3Q8N9H8 876 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 BBOF1Q8ND07 529 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 SPATA4Q8NEY3 305 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 JPH3Q8WXH2 748 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 AP2M1Q96CW1 435 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 SCARF2Q96GP6 870 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 COX14Q96I36 57 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 MRGPRX2Q96LB1 330 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 OR2M4Q96R27 311 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 RIOK2Q9BVS4 552 aaKnown RBP10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 CDH19Q9H159 772 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 ZFYVE1Q9HBF4 777 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 PKD2L2Q9NZM6 624 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 PRKAB1Q9Y478 270 aa10.9□□□□□ -0.66
TMEM39A-211ENST00000491685 TRBV23OR9-2A0A075B6M9 112 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 IGHV1OR21-1A0A087WYE8 117 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 FAM187AA6NFU0 413 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 FADS2P1A8MWK0 482 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 F5H423 210 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 SMAPO00193 183 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 SLC28A2O43868 658 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 CLDN7O95471 211 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 AP2A1O95782 977 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 TUBBP07437 444 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 APRTP07741 180 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 ZSCAN5DPP0CG00 497 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 ETS1P14921 441 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 NPY2RP49146 381 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 CYP4F2P78329 520 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 SRSF1Q07955 248 aaKnown RBP eCLIP10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 CDH17Q12864 832 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 GPS1Q13098 491 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 TMEM164Q5U3C3 297 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 KDELC1Q6UW63 502 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 PIM3Q86V86 326 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 NLRP8Q86W28 1048 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 DTX1Q86Y01 620 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 NRSN1Q8IZ57 195 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 BRSK1Q8TDC3 778 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 SLC37A2Q8TED4 501 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 SLCO2A1Q92959 643 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 MED8Q96G25 268 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 OXNAD1Q96HP4 312 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 LYSMD1Q96S90 227 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 CMKLR1Q99788 373 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 TBL1YQ9BQ87 522 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 FICDQ9BVA6 458 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 DDX47Q9H0S4 455 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 ARNT2Q9HBZ2 717 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 ASIC3Q9UHC3 531 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 CNOT6Q9ULM6 557 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 PKP3Q9Y446 797 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 PCDHGA4Q9Y5G9 962 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 BOD1L1Q8NFC6 3051 aa10.89□□□□□ -0.67
TMEM39A-211ENST00000491685 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 C1orf232A0A0U1RR37 186 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 MAGEB16A2A368 324 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 CTAGE15A4D2H0 777 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 DNAJC6O75061 913 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 PPFIA2O75334 1257 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 CTAGE8P0CG41 777 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 THRAP10827 490 aa10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 FGF3P11487 239 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-211ENST00000491685 CSRP3P50461 194 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms