RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 TRAF2Q12933 501 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 FRG1Q14331 258 aaKnown RBP7.53□□□□□ -1.2
CLDN1-202ENST00000490800 CRYMQ14894 314 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 SLC1A5Q15758 541 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 ANKRD20A4Q4UJ75 823 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 HSP90B2PQ58FF3 399 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 ZNF542PQ5EBM4 170 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 RALGPS1Q5JS13 557 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 PCID2Q5JVF3 399 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 SIRPB2Q5JXA9 342 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 SPANXN3Q5MJ09 141 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 AGBL2Q5U5Z8 902 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 SEL1L3Q68CR1 1132 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 FBXL19Q6PCT2 694 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 TRMT10BQ6PF06 316 aaKnown RBP7.53□□□□□ -1.2
CLDN1-202ENST00000490800 CES3Q6UWW8 571 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 CYS1Q717R9 158 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 KANSL1Q7Z3B3 1105 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 CROCCP2Q86T23 111 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 TMEM135Q86UB9 458 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 TMPRSS12Q86WS5 348 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 TDRPQ86YL5 185 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 KRT222Q8N1A0 295 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 RYBPQ8N488 228 aaPredicted RBP7.53□□□□□ -1.2
CLDN1-202ENST00000490800 OXR1Q8N573 874 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 PCDH20Q8N6Y1 951 aaKnown RBP7.53□□□□□ -1.2
CLDN1-202ENST00000490800 GOLGA6L1Q8N7Z2 621 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 TMEM145Q8NBT3 493 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 ISG20Q96AZ6 181 aaKnown RBP7.53□□□□□ -1.2
CLDN1-202ENST00000490800 PPP1R16AQ96I34 528 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 BMFQ96LC9 184 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 CCDC77Q9BR77 488 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 DHRS4Q9BTZ2 278 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 KIFC1Q9BW19 673 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 SLC17A9Q9BYT1 436 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 TM6SF2Q9BZW4 377 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 CEP44Q9C0F1 390 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 MRM3Q9HC36 420 aaKnown RBP7.53□□□□□ -1.2
CLDN1-202ENST00000490800 CHRAC1Q9NRG0 131 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 SMYD2Q9NRG4 433 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 EURLQ9NYK6 297 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 MOCS1Q9NZB8 636 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 SAMD15Q9P1V8 674 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 HECAQ9UBI9 543 aaPredicted RBP7.53□□□□□ -1.2
CLDN1-202ENST00000490800 FETUBQ9UGM5 382 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 LGALS13Q9UHV8 139 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 RAXQ9Y2V3 346 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 TCAF1Q9Y4C2 921 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 PCDHGA1Q9Y5H4 931 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 RAI2Q9Y5P3 530 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 TMEM131Q92545 1883 aa7.53□□□□□ -1.2
CLDN1-202ENST00000490800 ANKRD36A6QL64 1941 aa7.52□□□□□ -1.2
CLDN1-202ENST00000490800 MYLKQ15746 1914 aa7.52□□□□□ -1.2
CLDN1-202ENST00000490800 DSPP15924 2871 aaKnown RBP7.52□□□□□ -1.21
CLDN1-202ENST00000490800 ZCWPW2A0A1B0GU75 182 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 FAM159BA6NKW6 160 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 CXorf49A8MYA2 514 aaPredicted RBP7.52□□□□□ -1.21
CLDN1-202ENST00000490800 POC1B-GALNT4F8VUJ3 575 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 TRIM38O00635 465 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 SIGLEC6O43699 453 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 PIAS1O75925 651 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 USP1O94782 785 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 IGSF6O95976 241 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 GSRP00390 522 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 FGF1P05230 155 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 CDK4P11802 303 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 ADRB3P13945 408 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 CKMT2P17540 419 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 HLA-DPA1P20036 260 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 HNRNPA2B1P22626 353 aaKnown RBP7.52□□□□□ -1.21
CLDN1-202ENST00000490800 DGKAP23743 735 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 ADRA1DP25100 572 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 NMBRP28336 390 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 AKT2P31751 481 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 ACADVLP49748 655 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 NEK3P51956 506 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 TARDBPQ13148 414 aaKnown RBP eCLIP7.52□□□□□ -1.21
CLDN1-202ENST00000490800 GALNT3Q14435 633 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 POU6F1Q14863 301 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 RASA2Q15283 850 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 KLHL38Q2WGJ6 581 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 KBTBD12Q3ZCT8 623 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 TNFAIP8L3Q5GJ75 292 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 ARMC3Q5W041 872 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 KCTD16Q68DU8 428 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 GCNT7Q6ZNI0 430 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 Q6ZSR6 202 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 UNC5BQ8IZJ1 945 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 PPHLN1Q8NEY8 458 aaKnown RBP7.52□□□□□ -1.21
CLDN1-202ENST00000490800 OR2AP1Q8NGE2 309 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 OR6K2Q8NGY2 324 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 DCAKDQ8WVC6 231 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 VOPP1Q96AW1 172 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 ZNF669Q96BR6 464 aaPredicted RBP7.52□□□□□ -1.21
CLDN1-202ENST00000490800 TLCD1Q96CP7 247 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 MFSD3Q96ES6 412 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 PGM2Q96G03 612 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 ATP6V1G3Q96LB4 118 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 ZNF778Q96MU6 729 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 RANBP9Q96S59 729 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms