RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 PROSCO94903 275 aa18.69■□□□□ 0.58
GGPS1-206ENST00000488594 SLC4A1P02730 911 aa18.69■□□□□ 0.58
GGPS1-206ENST00000488594 PDGFAP04085 211 aa18.69■□□□□ 0.58
GGPS1-206ENST00000488594 SERPING1P05155 500 aa18.69■□□□□ 0.58
GGPS1-206ENST00000488594 PGDP52209 483 aa18.69■□□□□ 0.58
GGPS1-206ENST00000488594 ZBTB17Q13105 803 aa18.69■□□□□ 0.58
GGPS1-206ENST00000488594 SLC14A2Q15849 920 aa18.69■□□□□ 0.58
GGPS1-206ENST00000488594 ANO6Q4KMQ2 910 aa18.69■□□□□ 0.58
GGPS1-206ENST00000488594 NT5DC3Q86UY8 548 aa18.69■□□□□ 0.58
GGPS1-206ENST00000488594 KMT5CQ86Y97 462 aa18.69■□□□□ 0.58
GGPS1-206ENST00000488594 SIDT2Q8NBJ9 832 aaKnown RBP18.69■□□□□ 0.58
GGPS1-206ENST00000488594 CPT1CQ8TCG5 803 aa18.69■□□□□ 0.58
GGPS1-206ENST00000488594 IMP4Q96G21 291 aaKnown RBP18.69■□□□□ 0.58
GGPS1-206ENST00000488594 NAP1L5Q96NT1 182 aaPredicted RBP18.69■□□□□ 0.58
GGPS1-206ENST00000488594 PLEKHB1Q9UF11 243 aaPredicted RBP18.69■□□□□ 0.58
GGPS1-206ENST00000488594 PCDHGA9Q9Y5G4 932 aaKnown RBP18.69■□□□□ 0.58
GGPS1-206ENST00000488594 A0A087X0T9 212 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 GOLGA6L22H0YM25 854 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 DNAJB5O75953 348 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 TIAF1O95411 115 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 PIRTP0C851 137 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 FAM228BP0C875 321 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 BPIP17213 487 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 PTPN4P29074 926 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 UQCRFS1P47985 274 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 DRG2P55039 364 aaKnown RBP18.68■□□□□ 0.58
GGPS1-206ENST00000488594 RPS15P62841 145 aaKnown RBP18.68■□□□□ 0.58
GGPS1-206ENST00000488594 PDE1BQ01064 536 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 CDK18Q07002 472 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 GTF2H3Q13889 308 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 NR1I3Q14994 352 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 NFKBIBQ15653 356 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 PWWP2BQ6NUJ5 590 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 ALKBH5Q6P6C2 394 aaKnown RBP18.68■□□□□ 0.58
GGPS1-206ENST00000488594 SYVN1Q86TM6 617 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 TRAPPC5Q8IUR0 188 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 BRSK1Q8TDC3 778 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 SPTBN1Q01082 2364 aaKnown RBP18.68■□□□□ 0.58
GGPS1-206ENST00000488594 IGHV5-51A0A0C4DH38 117 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 MBD3O95983 291 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 SERPINC1P01008 464 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 FOLR1P15328 257 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 GNLYP22749 145 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 FECHP22830 423 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 KHDC1Q4VXA5 237 aaKnown RBP18.68■□□□□ 0.58
GGPS1-206ENST00000488594 ZFYVE27Q5T4F4 411 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 CCDC70Q6NSX1 233 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 C11orf96Q7Z7L8 435 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 ZNF514Q96K75 400 aaPredicted RBP18.68■□□□□ 0.58
GGPS1-206ENST00000488594 TTC25Q96NG3 672 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 RNF157Q96PX1 679 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 CD180Q99467 661 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 SLC25A23Q9BV35 468 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 TRIM55Q9BYV6 548 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 SLC25A51Q9H1U9 297 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 CBX8Q9HC52 389 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 UVRAGQ9P2Y5 699 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 WDR37Q9Y2I8 494 aa18.68■□□□□ 0.58
GGPS1-206ENST00000488594 NOTCH2Q04721 2471 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 ZNF106Q9H2Y7 1883 aaKnown RBP18.67■□□□□ 0.58
GGPS1-206ENST00000488594 TEX15Q9BXT5 2789 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 ZNF487B1APH4 448 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 ARL4DP49703 201 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 TAS2R40P59535 323 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 DMPKQ09013 629 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 TMEM115Q12893 351 aaPredicted RBP18.67■□□□□ 0.58
GGPS1-206ENST00000488594 PCSK7Q16549 785 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 ZDHHC20Q5W0Z9 365 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 PAPD7Q5XG87 772 aaKnown RBP18.67■□□□□ 0.58
GGPS1-206ENST00000488594 SSC4DQ8WTU2 575 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 TADA1Q96BN2 335 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 AGAP3Q96P47 875 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 ZCCHC2Q9C0B9 1178 aaKnown RBP18.67■□□□□ 0.58
GGPS1-206ENST00000488594 MLXIPLQ9NP71 852 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 ACSS2Q9NR19 701 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 FGF21Q9NSA1 209 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 CUEDC1Q9NWM3 386 aaPredicted RBP18.67■□□□□ 0.58
GGPS1-206ENST00000488594 CTTNBP2NLQ9P2B4 639 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 TRIM10Q9UDY6 481 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 HEY1Q9Y5J3 304 aa18.67■□□□□ 0.58
GGPS1-206ENST00000488594 CPNE3O75131 537 aaKnown RBP18.66■□□□□ 0.58
GGPS1-206ENST00000488594 NDST3O95803 873 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 KDELR1P24390 212 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 HSD11B2P80365 405 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 ZBED6P86452 979 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 AP1B1Q10567 949 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 KCNAB1Q14722 419 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 PDK1Q15118 436 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 ATP13A5Q4VNC0 1218 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 AMZ2Q86W34 360 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 PLD5Q8N7P1 536 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 GDAP1Q8TB36 358 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 DTX3LQ8TDB6 740 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.66■□□□□ 0.58
GGPS1-206ENST00000488594 IQCDQ96DY2 449 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 ING2Q9H160 280 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 MAP4K5Q9Y4K4 846 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 PCDHGB7Q9Y5F8 929 aa18.66■□□□□ 0.58
GGPS1-206ENST00000488594 TLCD2A6NGC4 264 aa18.65■□□□□ 0.58
GGPS1-206ENST00000488594 PPP1R12AO14974 1030 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms