RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 BRAFP15056 766 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 F8A1P23610 371 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 DRG2P55039 364 aaKnown RBP12.89□□□□□ -0.35
PABPC4-212ENST00000477556 FOXK1P85037 733 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 TMEM115Q12893 351 aaPredicted RBP12.89□□□□□ -0.35
PABPC4-212ENST00000477556 TRIM14Q14142 442 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 GPR18Q14330 331 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 ASTE1Q2TB18 679 aaPredicted RBP12.89□□□□□ -0.35
PABPC4-212ENST00000477556 KHDC1Q4VXA5 237 aaKnown RBP12.89□□□□□ -0.35
PABPC4-212ENST00000477556 FAM182AQ5T1J6 154 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 ATP1A1-AS1Q5TC04 95 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 ZDHHC20Q5W0Z9 365 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 IRGCQ6NXR0 463 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 FAM92BQ6ZTR7 304 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 PPP1R3BQ86XI6 285 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 ZNF547Q8IVP9 402 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 RNF25Q96BH1 459 aaPredicted RBP12.89□□□□□ -0.35
PABPC4-212ENST00000477556 ELMO2Q96JJ3 720 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 TEKT5Q96M29 485 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 ZCCHC2Q9C0B9 1178 aaKnown RBP12.89□□□□□ -0.35
PABPC4-212ENST00000477556 BPIFA1Q9NP55 256 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 DDX56Q9NY93 547 aaKnown RBP12.89□□□□□ -0.35
PABPC4-212ENST00000477556 TRIM10Q9UDY6 481 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 EPHA6Q9UF33 1036 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 FAM153AQ9UHL3 310 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 LNPEPQ9UIQ6 1025 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 POLHQ9Y253 713 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 SPO11Q9Y5K1 396 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 PTPN13Q12923 2485 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 NAV2Q8IVL1 2488 aa12.89□□□□□ -0.35
PABPC4-212ENST00000477556 MKRN2OSH3BPM6 223 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 AURKAO14965 403 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 SPAG6O75602 509 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 TPM1P09493 284 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 FGF5P12034 268 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 TNNT1P13805 278 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 PTPN3P26045 913 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 HMGCLP35914 325 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 SLC1A1P43005 524 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 NR2C2P49116 596 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 TFDP2Q14188 446 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 ATP13A5Q4VNC0 1218 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 KLHL35Q6PF15 583 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 B4GALNT4Q76KP1 1039 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 AMZ2Q86W34 360 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 RHOT1Q8IXI2 618 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 TFB1MQ8WVM0 346 aaKnown RBP12.88□□□□□ -0.35
PABPC4-212ENST00000477556 KLHL6Q8WZ60 621 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 RNF31Q96EP0 1072 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 DNAJC7Q99615 494 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 RAB33BQ9H082 229 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 PDE7BQ9NP56 450 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 UBP1Q9NZI7 540 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.88□□□□□ -0.35
PABPC4-212ENST00000477556 HACD3Q9P035 362 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 TMPRSS11EQ9UL52 423 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 PADI1Q9ULC6 663 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 KCNMB2Q9Y691 235 aa12.88□□□□□ -0.35
PABPC4-212ENST00000477556 NBASA2RRP1 2371 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 DOPEY2Q9Y3R5 2298 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 GOLGA6L3A6NEY3 463 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 MTSS1O43312 755 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 CBFA2T2O43439 604 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 KIF1CO43896 1103 aaKnown RBP12.87□□□□□ -0.35
PABPC4-212ENST00000477556 EPOP01588 193 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 NELFEP18615 380 aaKnown RBP12.87□□□□□ -0.35
PABPC4-212ENST00000477556 FECHP22830 423 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 SPAM1P38567 509 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 WNT3AP56704 352 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 KLRB1Q12918 225 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 DNASE1L3Q13609 305 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 UBAP2LQ14157 1087 aaKnown RBP12.87□□□□□ -0.35
PABPC4-212ENST00000477556 ERV3-1Q14264 604 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 PRKD1Q15139 912 aaPredicted RBP12.87□□□□□ -0.35
PABPC4-212ENST00000477556 IGFBP7Q16270 282 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 PPP2R5EQ16537 467 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.87□□□□□ -0.35
PABPC4-212ENST00000477556 LDLRAP1Q5SW96 308 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 MFSD7Q6UXD7 560 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 C11orf96Q7Z7L8 435 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 SIDT2Q8NBJ9 832 aaKnown RBP12.87□□□□□ -0.35
PABPC4-212ENST00000477556 DTX3LQ8TDB6 740 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 UBXN4Q92575 508 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 CCDC42Q96M95 316 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 KLHL8Q9P2G9 620 aaPredicted RBP12.87□□□□□ -0.35
PABPC4-212ENST00000477556 ANKMY1Q9P2S6 941 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 RARRES3Q9UL19 164 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 TP53TG5Q9Y2B4 290 aa12.87□□□□□ -0.35
PABPC4-212ENST00000477556 UBR5O95071 2799 aaPredicted RBP12.86□□□□□ -0.35
PABPC4-212ENST00000477556 LOC285095A0A1B0GVY8 99 aa12.86□□□□□ -0.35
PABPC4-212ENST00000477556 CDC14CA4D256 554 aa12.86□□□□□ -0.35
PABPC4-212ENST00000477556 SPOPO43791 374 aa12.86□□□□□ -0.35
PABPC4-212ENST00000477556 RFPL1O75677 317 aa12.86□□□□□ -0.35
PABPC4-212ENST00000477556 POP7O75817 140 aaKnown RBP12.86□□□□□ -0.35
PABPC4-212ENST00000477556 NFKB1P19838 968 aa12.86□□□□□ -0.35
PABPC4-212ENST00000477556 ARL4DP49703 201 aa12.86□□□□□ -0.35
PABPC4-212ENST00000477556 SRSF1Q07955 248 aaKnown RBP eCLIP12.86□□□□□ -0.351e-7■□□□□ 8.5
PABPC4-212ENST00000477556 DMPKQ09013 629 aa12.86□□□□□ -0.35
PABPC4-212ENST00000477556 TUBB3Q13509 450 aa12.86□□□□□ -0.35
PABPC4-212ENST00000477556 PLCL1Q15111 1095 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms