RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 HLCSP50747 726 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 GRSF1Q12849 480 aaKnown RBP eCLIP8.31□□□□□ -1.08
VAPB-205ENST00000476395 ZNF846Q147U1 533 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 CTF1Q16619 201 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 ZNF549Q6P9A3 640 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 TXNDC11Q6PKC3 985 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 CAMK1DQ8IU85 385 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 HS3ST5Q8IZT8 346 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 DHRSXQ8N5I4 330 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 NATD1Q8N6N6 113 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 MFSD2AQ8NA29 543 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 SLC22A17Q8WUG5 538 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 SEPT8Q92599 483 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 GLMNQ92990 594 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 MS4A4AQ96JQ5 239 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 ATXN3LQ9H3M9 355 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 CNGB3Q9NQW8 809 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 FLRT1Q9NZU1 646 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 TTC24A2A3L6 582 aaPredicted RBP8.31□□□□□ -1.08
VAPB-205ENST00000476395 TBX1O43435 398 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 NADKO95544 446 aaPredicted RBP8.31□□□□□ -1.08
VAPB-205ENST00000476395 DLGAP3O95886 979 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 MTHFD2P13995 350 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 GTF2E2P29084 291 aaKnown RBP8.31□□□□□ -1.08
VAPB-205ENST00000476395 CAPGP40121 348 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 ARSDP51689 593 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 CLCNKBP51801 687 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 TMBIM6P55061 237 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 NCS1P62166 190 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 SH3BP2P78314 561 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 FASTKQ14296 549 aaKnown RBP8.31□□□□□ -1.08
VAPB-205ENST00000476395 ATP6AP1Q15904 470 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 MEP1AQ16819 746 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 ADPRMQ3LIE5 342 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 PLA2G4EQ3MJ16 856 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 SV2CQ496J9 727 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 IRAK1BP1Q5VVH5 260 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 SIGIRRQ6IA17 410 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 FAM45BPQ6NSW5 357 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 TRAF7Q6Q0C0 670 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 ZNF467Q7Z7K2 595 aaPredicted RBP8.31□□□□□ -1.08
VAPB-205ENST00000476395 ISCA2Q86U28 154 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 CUZD1Q86UP6 607 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 PIM3Q86V86 326 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 FAM20CQ8IXL6 584 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 SVIPQ8NHG7 77 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 FAM45AQ8TCE6 357 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 HCAR2Q8TDS4 363 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 RPL3LQ92901 407 aaKnown RBP8.31□□□□□ -1.08
VAPB-205ENST00000476395 PBXIP1Q96AQ6 731 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 MRPL57Q9BQC6 102 aaKnown RBP8.31□□□□□ -1.08
VAPB-205ENST00000476395 RHNO1Q9BSD3 238 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 GLOD4Q9HC38 313 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 MARCH4Q9P2E8 410 aaPredicted RBP8.31□□□□□ -1.08
VAPB-205ENST00000476395 STAP1Q9ULZ2 295 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 PIN4Q9Y237 131 aaKnown RBP8.31□□□□□ -1.08
VAPB-205ENST00000476395 MED16Q9Y2X0 877 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 CCL22O00626 93 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 SNPHO15079 494 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 INPP4BO15327 924 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 CLASP2O75122 1294 aaKnown RBP8.3□□□□□ -1.08
VAPB-205ENST00000476395 ABCB1P08183 1280 aaPredicted RBP8.3□□□□□ -1.08
VAPB-205ENST00000476395 CAPN3P20807 821 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 FMO4P31512 558 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 PNPLA4P41247 253 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 LEPRP48357 1165 aaKnown RBP8.3□□□□□ -1.08
VAPB-205ENST00000476395 SEMA3AQ14563 771 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 UNC50Q53HI1 259 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 ZNF773Q6PK81 442 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 LDB1Q86U70 411 aaPredicted RBP8.3□□□□□ -1.08
VAPB-205ENST00000476395 GRAMD2AQ8IUY3 354 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.3□□□□□ -1.08
VAPB-205ENST00000476395 SPARTQ8N0X7 666 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 SCML4Q8N228 414 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 SCAMP5Q8TAC9 235 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 TOP1MTQ969P6 601 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 TNIP3Q96KP6 325 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 TEX37Q96LM6 180 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 ZNF560Q96MR9 790 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 VAT1Q99536 393 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 FICDQ9BVA6 458 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 CCDC90BQ9GZT6 254 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 CCSER2Q9H7U1 834 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 TRIM39Q9HCM9 518 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 ARMC1Q9NVT9 282 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 IL37Q9NZH6 218 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 COQ3Q9NZJ6 369 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 USP34Q70CQ2 3546 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 MICAL3Q7RTP6 2002 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 TCRBV5S2A0A599 114 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 MROH6A6NGR9 719 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 F8W810 466 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 SLCO1B7G3V0H7 640 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 NUAK1O60285 661 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 IGHA2P01877 340 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 GP2P55259 537 aaKnown RBP8.3□□□□□ -1.08
VAPB-205ENST00000476395 ARPP19P56211 112 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 BPIFB3P59826 476 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 ECT2LQ008S8 904 aa8.3□□□□□ -1.08
VAPB-205ENST00000476395 OCA2Q04671 838 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms