RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 THAP4Q8WY91 577 aa17.5■□□□□ 0.39
PCGF3-209ENST00000475288 CXorf40BQ96DE9 158 aa17.5■□□□□ 0.39
PCGF3-209ENST00000475288 GPR63Q9BZJ6 419 aa17.5■□□□□ 0.39
PCGF3-209ENST00000475288 TWSG1Q9GZX9 223 aa17.5■□□□□ 0.39
PCGF3-209ENST00000475288 RARRES3Q9UL19 164 aa17.5■□□□□ 0.39
PCGF3-209ENST00000475288 SHOC2Q9UQ13 582 aa17.5■□□□□ 0.39
PCGF3-209ENST00000475288 DNAJC16Q9Y2G8 782 aa17.5■□□□□ 0.39
PCGF3-209ENST00000475288 OR52A4PA6NMU1 304 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 SERPINC1P01008 464 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 BPIP17213 487 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 FECHP22830 423 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 RPL10P27635 214 aaKnown RBP17.49■□□□□ 0.39
PCGF3-209ENST00000475288 CASP14P31944 242 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 GJC1P36383 396 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 PBX1P40424 430 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 HALP42357 657 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 ZBED6P86452 979 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 SEPT7Q16181 437 aaKnown RBP17.49■□□□□ 0.39
PCGF3-209ENST00000475288 UGT8Q16880 541 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 PLA2G4EQ3MJ16 856 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 KHDC1Q4VXA5 237 aaKnown RBP17.49■□□□□ 0.39
PCGF3-209ENST00000475288 PLD5Q8N7P1 536 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 BRSK1Q8TDC3 778 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 LRRN4Q8WUT4 740 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 CD180Q99467 661 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 ACTL8Q9H568 366 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 LRRC4CQ9HCJ2 640 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 TMPRSS11EQ9UL52 423 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 CAPN11Q9UMQ6 739 aa17.49■□□□□ 0.39
PCGF3-209ENST00000475288 PCDHGA9Q9Y5G4 932 aaKnown RBP17.49■□□□□ 0.39
PCGF3-209ENST00000475288 UNC79Q9P2D8 2635 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 TIAF1O95411 115 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 NDST3O95803 873 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 KDELR1P24390 212 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 ACY1Q03154 408 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 TMEM115Q12893 351 aaPredicted RBP17.48■□□□□ 0.39
PCGF3-209ENST00000475288 LAMB3Q13751 1172 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 ZDHHC20Q5W0Z9 365 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 PAPD7Q5XG87 772 aaKnown RBP17.48■□□□□ 0.39
PCGF3-209ENST00000475288 SLC9A4Q6AI14 798 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 CAPRIN2Q6IMN6 1127 aaKnown RBP17.48■□□□□ 0.39
PCGF3-209ENST00000475288 IRGCQ6NXR0 463 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 FAM92BQ6ZTR7 304 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 SYVN1Q86TM6 617 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 TMEM135Q86UB9 458 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 CPNE8Q86YQ8 564 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 SIDT2Q8NBJ9 832 aaKnown RBP17.48■□□□□ 0.39
PCGF3-209ENST00000475288 ELMO2Q96JJ3 720 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 OLFM3Q96PB7 478 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 CBX8Q9HC52 389 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 MLXIPLQ9NP71 852 aa17.48■□□□□ 0.39
PCGF3-209ENST00000475288 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.48■□□□□ 0.39
PCGF3-209ENST00000475288 DNMT3AQ9Y6K1 912 aaPredicted RBP17.48■□□□□ 0.39
PCGF3-209ENST00000475288 IGHV5-51A0A0C4DH38 117 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 VPS4BO75351 444 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 MTX2O75431 263 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 PDGFAP04085 211 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 H2AFZP0C0S5 128 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 PIRTP0C851 137 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 PTPN4P29074 926 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 HMGCLP35914 325 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 TUBB3Q13509 450 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 GTF2H3Q13889 308 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 IQCB1Q15051 598 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 PDK1Q15118 436 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 NFKBIBQ15653 356 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 CCDC70Q6NSX1 233 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 PWWP2BQ6NUJ5 590 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 ZNF517Q6ZMY9 492 aaPredicted RBP17.47■□□□□ 0.39
PCGF3-209ENST00000475288 H2AFVQ71UI9 128 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 CARFQ8N187 725 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 RAPGEF5Q92565 580 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 ZCCHC2Q9C0B9 1178 aaKnown RBP17.47■□□□□ 0.39
PCGF3-209ENST00000475288 TRABDQ9H4I3 376 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 TMEM63CQ9P1W3 806 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 CTTNBP2NLQ9P2B4 639 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 VPS4AQ9UN37 437 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 WDR37Q9Y2I8 494 aa17.47■□□□□ 0.39
PCGF3-209ENST00000475288 SPTBN1Q01082 2364 aaKnown RBP17.47■□□□□ 0.39
PCGF3-209ENST00000475288 PPP1R12AO14974 1030 aaPredicted RBP17.46■□□□□ 0.39
PCGF3-209ENST00000475288 FOLR1P15328 257 aa17.46■□□□□ 0.39
PCGF3-209ENST00000475288 DRG2P55039 364 aaKnown RBP17.46■□□□□ 0.39
PCGF3-209ENST00000475288 AP1B1Q10567 949 aa17.46■□□□□ 0.39
PCGF3-209ENST00000475288 ATP13A5Q4VNC0 1218 aa17.46■□□□□ 0.39
PCGF3-209ENST00000475288 C4orf17Q53FE4 359 aa17.46■□□□□ 0.39
PCGF3-209ENST00000475288 TRAPPC5Q8IUR0 188 aa17.46■□□□□ 0.39
PCGF3-209ENST00000475288 EFCAB3Q8N7B9 438 aa17.46■□□□□ 0.39
PCGF3-209ENST00000475288 OR8K5Q8NH50 307 aa17.46■□□□□ 0.39
PCGF3-209ENST00000475288 CTNNBL1Q8WYA6 563 aaPredicted RBP17.46■□□□□ 0.39
PCGF3-209ENST00000475288 ZNF514Q96K75 400 aaPredicted RBP17.46■□□□□ 0.39
PCGF3-209ENST00000475288 AGAP3Q96P47 875 aa17.46■□□□□ 0.39
PCGF3-209ENST00000475288 TRIM55Q9BYV6 548 aa17.46■□□□□ 0.39
PCGF3-209ENST00000475288 PCDHGB7Q9Y5F8 929 aa17.46■□□□□ 0.39
PCGF3-209ENST00000475288 HEY1Q9Y5J3 304 aa17.46■□□□□ 0.39
PCGF3-209ENST00000475288 TLCD2A6NGC4 264 aa17.45■□□□□ 0.38
PCGF3-209ENST00000475288 TTLL8A6PVC2 850 aa17.45■□□□□ 0.38
PCGF3-209ENST00000475288 EPOP01588 193 aa17.45■□□□□ 0.38
PCGF3-209ENST00000475288 ZFXP17010 805 aaPredicted RBP17.45■□□□□ 0.38
PCGF3-209ENST00000475288 PGDP52209 483 aa17.45■□□□□ 0.38
PCGF3-209ENST00000475288 PPP1CAP62136 330 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms