RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TRAF2Q12933 501 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 XKR7Q5GH72 579 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 GLYATQ6IB77 296 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 PSAPL1Q6NUJ1 521 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 RMDN1Q96DB5 314 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 CCDC97Q96F63 343 aaPredicted RBP20.88■□□□□ 0.93
COL18A1-207ENST00000473212 PLEKHA8Q96JA3 519 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 HGH1Q9BTY7 390 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 YTHDF1Q9BYJ9 559 aaKnown RBP20.88■□□□□ 0.93
COL18A1-207ENST00000473212 BRINP2Q9C0B6 783 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 FANCEQ9HB96 536 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 TYW5A2RUC4 315 aaKnown RBP20.88■□□□□ 0.93
COL18A1-207ENST00000473212 CHEK2O96017 543 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 INHBBP09529 407 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 UROSP10746 265 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 HTR1EP28566 365 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 SLC6A4P31645 630 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 PTPRNQ16849 979 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 VARS2Q5ST30 1063 aaKnown RBP20.88■□□□□ 0.93
COL18A1-207ENST00000473212 ITIH5Q86UX2 942 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 ZC3H7AQ8IWR0 971 aaKnown RBP20.88■□□□□ 0.93
COL18A1-207ENST00000473212 C2orf69Q8N8R5 385 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 OR52B6Q8NGF0 335 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 TRIB3Q96RU7 358 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 SPON2Q9BUD6 331 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 NTN4Q9HB63 628 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 PDFQ9HBH1 243 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 EIF2B4Q9UI10 523 aaKnown RBP20.88■□□□□ 0.93
COL18A1-207ENST00000473212 MAGED1Q9Y5V3 778 aaPredicted RBP20.88■□□□□ 0.93
COL18A1-207ENST00000473212 LCHNA4D1U4 455 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 NOL3O60936 208 aaKnown RBP20.87■□□□□ 0.93
COL18A1-207ENST00000473212 ZBTB11O95625 1053 aaPredicted RBP20.87■□□□□ 0.93
COL18A1-207ENST00000473212 ESRRBO95718 433 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 MAP4P27816 1152 aaKnown RBP20.87■□□□□ 0.93
COL18A1-207ENST00000473212 HOXD9P28356 352 aaPredicted RBP20.87■□□□□ 0.93
COL18A1-207ENST00000473212 SHMT2P34897 504 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 EMX2Q04743 252 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 GRIK2Q13002 908 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 TYSND1Q2T9J0 566 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 PROSER1Q86XN7 944 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 LGI2Q8N0V4 545 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 FNDC5Q8NAU1 212 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 OR13F1Q8NGS4 319 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 BPIFB1Q8TDL5 484 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 TRIB2Q92519 343 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 NSMCE2Q96MF7 247 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 CCDC68Q9H2F9 335 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 PCTPQ9UKL6 214 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 PCDHGA11Q9Y5H2 935 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 TRIM64BA6NI03 449 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 PCNAP12004 261 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 ERVK-8P63133 956 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 NFATC3Q12968 1075 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 TRIP4Q15650 581 aaPredicted RBP20.87■□□□□ 0.93
COL18A1-207ENST00000473212 ZNF773Q6PK81 442 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 RSPO2Q6UXX9 243 aaPredicted RBP20.87■□□□□ 0.93
COL18A1-207ENST00000473212 RIMKLAQ8IXN7 391 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 CDYL2Q8N8U2 506 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 PROKR1Q8TCW9 393 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 PEX13Q92968 403 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 ACDQ96AP0 544 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 SEPT5Q99719 369 aaPredicted RBP20.87■□□□□ 0.93
COL18A1-207ENST00000473212 NUSAP1Q9BXS6 441 aaKnown RBP20.87■□□□□ 0.93
COL18A1-207ENST00000473212 LRRC3Q9BY71 257 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 SARS2Q9NP81 518 aaKnown RBP20.87■□□□□ 0.93
COL18A1-207ENST00000473212 PCDHGC4Q9Y5F7 938 aa20.87■□□□□ 0.93
COL18A1-207ENST00000473212 DRGXA6NNA5 263 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 H0YAE9 185 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 SYNCRIPO60506 623 aaKnown RBP20.86■□□□□ 0.93
COL18A1-207ENST00000473212 OR4F21O95013 312 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 CPNE6O95741 557 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 ENO2P09104 434 aaPredicted RBP20.86■□□□□ 0.93
COL18A1-207ENST00000473212 ZNF140P52738 457 aaPredicted RBP20.86■□□□□ 0.93
COL18A1-207ENST00000473212 RPS24P62847 133 aaKnown RBP20.86■□□□□ 0.93
COL18A1-207ENST00000473212 IRF5Q13568 498 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 SELPLGQ14242 412 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 PDCD4Q53EL6 469 aaKnown RBP20.86■□□□□ 0.93
COL18A1-207ENST00000473212 C6orf136Q5SQH8 315 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 C17orf99Q6UX52 265 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 GIPC2Q8TF65 315 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 PPM1MQ96MI6 270 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 TUBA1CQ9BQE3 449 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 FBXO44Q9H4M3 255 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 SH3GLB1Q9Y371 365 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 PLXNA3P51805 1871 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 FAM234BA2RU67 622 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 IQCA1LA6NCM1 817 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 SYCE1LA8MT33 242 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 OAZ2O95190 189 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 SERPINF2P08697 491 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 TCF3P15923 654 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 CCNA2P20248 432 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 MRPL19P49406 292 aaKnown RBP20.86■□□□□ 0.93
COL18A1-207ENST00000473212 ARSFP54793 590 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 MTPNP58546 118 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 GRSF1Q12849 480 aaKnown RBP eCLIP20.86■□□□□ 0.93
COL18A1-207ENST00000473212 CST9Q5W186 159 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 C16orf87Q6PH81 154 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 HID1Q8IV36 788 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 EEF1AKMT1Q8WVE0 214 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms