RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 CDK14O94921 469 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 LCA5LO95447 670 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 MT-CYBP00156 380 aaPredicted RBP9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 FAM228BP0C875 321 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 MYBL1P10243 752 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 BPIP17213 487 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 XRCC1P18887 633 aaPredicted RBP9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 CCNCP24863 283 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 ANP32AP39687 249 aaKnown RBP9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 PRKCIP41743 596 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 CD97P48960 835 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 ARL4DP49703 201 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 ZNF135P52742 658 aaPredicted RBP9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 PMS2P54278 862 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 FILIP1LQ4L180 1135 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 TIGD7Q6NT04 549 aaPredicted RBP9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 TCTN3Q6NUS6 607 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 PPP1R2P3Q6NXS1 205 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 NT5DC3Q86UY8 548 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 SLC25A41Q8N5S1 370 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 C19orf60Q96EN9 201 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 TRIM11Q96F44 468 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 SLC25A23Q9BV35 468 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 PACSIN1Q9BY11 444 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 KLHL25Q9H0H3 589 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 RMI1Q9H9A7 625 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 RARRES3Q9UL19 164 aa9.91□□□□□ -0.82
SCAMP3-205ENST00000472397 SPTAN1Q13813 2472 aaKnown RBP9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 ZNF106Q9H2Y7 1883 aaKnown RBP9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 OR2AG2A6NM03 316 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 MYO1FO00160 1098 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 POP7O75817 140 aaKnown RBP9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 SERPINC1P01008 464 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 ANKRD34CP0C6C1 535 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 FGF5P12034 268 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 NELFEP18615 380 aaKnown RBP9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 IDSP22304 550 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 CA4P22748 312 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 HNRNPH3P31942 346 aaKnown RBP9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 PTGIRP43119 386 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 CAPZBP47756 277 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 CLCNKAP51800 687 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 PGDP52209 483 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 CTSCP53634 463 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 FOXL2P58012 376 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 SEMA5AQ13591 1074 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 MAP7Q14244 749 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 NFE2L1Q14494 772 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 PLCL1Q15111 1095 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 HADHQ16836 314 aaKnown RBP9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 ATP13A5Q4VNC0 1218 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 HGSNATQ68CP4 663 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 TMC3Q7Z5M5 1100 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 TMEM151BQ8IW70 566 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 TRAM1L1Q8N609 369 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 BEND7Q8N7W2 519 aaPredicted RBP9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 SLC38A9Q8NBW4 561 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 KLHL6Q8WZ60 621 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 CHST8Q9H2A9 424 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 SLC40A1Q9NP59 571 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 ACSS2Q9NR19 701 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 IMP3Q9NV31 184 aaKnown RBP9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 CTTNBP2NLQ9P2B4 639 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 HYOU1Q9Y4L1 999 aa9.9□□□□□ -0.82
SCAMP3-205ENST00000472397 NBPF19A0A087WUL8 3843 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 NOTCH2Q04721 2471 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 TCP11X1B4DZS4 312 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 CHUKO15111 745 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 CYP1A2P05177 515 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 POLBP06746 335 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 PTPN4P29074 926 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 CHRNA4P43681 627 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 TMEM115Q12893 351 aaPredicted RBP9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 GPS2Q13227 327 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 IL11RAQ14626 422 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 MESDQ14696 234 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 CHRNA6Q15825 494 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 RPE65Q16518 533 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 KYNUQ16719 465 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 DNTTIP2Q5QJE6 756 aaKnown RBP9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 ALG1LQ6GMV1 187 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 ABRAXAS1Q6UWZ7 409 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 FAM151BQ6UXP7 276 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 PRSS42Q7Z5A4 293 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 C11orf96Q7Z7L8 435 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 RFX6Q8HWS3 928 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 TMEM126BQ8IUX1 230 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 NIPA2Q8N8Q9 360 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 RASGEF1AQ8N9B8 481 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 SSC4DQ8WTU2 575 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 ZDHHC12Q96GR4 267 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 TSGA13Q96PP4 275 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 TRIB3Q96RU7 358 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 LYSMD1Q96S90 227 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 ADGRE3Q9BY15 652 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 WWP1Q9H0M0 922 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 ING2Q9H160 280 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 PDE7BQ9NP56 450 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 FGF21Q9NSA1 209 aa9.89□□□□□ -0.83
SCAMP3-205ENST00000472397 SAE1Q9UBE0 346 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms