RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 KLHL38Q2WGJ6 581 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 HLA-BQ31612 363 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 PYCR3Q53H96 274 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 TMEM220Q6QAJ8 160 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 RD3Q7Z3Z2 195 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 CLDN19Q8N6F1 224 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 PNPLA1Q8N8W4 532 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 SGF29Q96ES7 293 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 CPNE1Q99829 537 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 P2RY12Q9H244 342 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 CCDC68Q9H2F9 335 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 SMOC1Q9H4F8 434 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 FBXO6Q9NRD1 293 aaPredicted RBP15□□□□□ -0.01
SNIP1-202ENST00000468040 SMYD2Q9NRG4 433 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 TRNAU1APQ9NX07 287 aaKnown RBP15□□□□□ -0.01
SNIP1-202ENST00000468040 APOBEC3BQ9UH17 382 aaKnown RBP15□□□□□ -0.01
SNIP1-202ENST00000468040 CORO1CQ9ULV4 474 aaPredicted RBP15□□□□□ -0.01
SNIP1-202ENST00000468040 CRYL1Q9Y2S2 319 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 COMMD10Q9Y6G5 202 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 DNMT3AQ9Y6K1 912 aaPredicted RBP15□□□□□ -0.01
SNIP1-202ENST00000468040 BPTFQ12830 3046 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 TP53BP1Q12888 1972 aaPredicted RBP14.99□□□□□ -0.01
SNIP1-202ENST00000468040 PCDH15Q96QU1 1955 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 FTH1P02794 183 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 FUCA1P04066 466 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 CTSEP14091 401 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 VCLP18206 1134 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 CD151P48509 253 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 CTSCP53634 463 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 SPEM2Q0P670 501 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 ZNF542PQ5EBM4 170 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 UBAP2Q5T6F2 1119 aaKnown RBP14.99□□□□□ -0.01
SNIP1-202ENST00000468040 KCTD16Q68DU8 428 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 PTRHD1Q6GMV3 140 aaKnown RBP14.99□□□□□ -0.01
SNIP1-202ENST00000468040 TCEAL6Q6IPX3 200 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 CRTC3Q6UUV7 619 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 STRA8Q7Z7C7 330 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 ZNF547Q8IVP9 402 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 MREGQ8N565 214 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 PPM1NQ8N819 430 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 TCEAL3Q969E4 200 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 CCDC97Q96F63 343 aaPredicted RBP14.99□□□□□ -0.01
SNIP1-202ENST00000468040 LINC00615Q96LM1 132 aaPredicted RBP14.99□□□□□ -0.01
SNIP1-202ENST00000468040 TIMM29Q9BSF4 260 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 GTPBP2Q9BX10 602 aaKnown RBP14.99□□□□□ -0.01
SNIP1-202ENST00000468040 GAREM1Q9H706 876 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 FSCN3Q9NQT6 498 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 SEMA4GQ9NTN9 838 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 SLC17A6Q9P2U8 582 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 SPASTQ9UBP0 616 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 KLF15Q9UIH9 416 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 PNMA8BQ9ULN7 279 aaPredicted RBP14.99□□□□□ -0.01
SNIP1-202ENST00000468040 GPSM3Q9Y4H4 160 aa14.99□□□□□ -0.01
SNIP1-202ENST00000468040 LRP4O75096 1905 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 PI4KAP42356 2102 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 A0A1B0GTQ1 180 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 LNP1A1A4G5 178 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 CXorf49A8MYA2 514 aaPredicted RBP14.98□□□□□ -0.01
SNIP1-202ENST00000468040 SGTAO43765 313 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 KCNJ13O60928 360 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 HAUS5O94927 633 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 AHSGP02765 367 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 PKMP14618 531 aaKnown RBP14.98□□□□□ -0.01
SNIP1-202ENST00000468040 HSD17B3P37058 310 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 GP5P40197 560 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 CCT8P50990 548 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 CSE1LP55060 971 aaKnown RBP14.98□□□□□ -0.01
SNIP1-202ENST00000468040 ILF3Q12906 894 aaKnown RBP eCLIP14.98□□□□□ -0.01
SNIP1-202ENST00000468040 SLC29A2Q14542 456 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 ELOCQ15369 112 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 INSCQ1MX18 579 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 PRRT3Q5FWE3 981 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 ZNF789Q5FWF6 425 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 CNSTQ6PJW8 725 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 AMZ2Q86W34 360 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 SDR16C5Q8N3Y7 309 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 FSTL5Q8N475 847 aaPredicted RBP14.98□□□□□ -0.01
SNIP1-202ENST00000468040 BIRC8Q96P09 236 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 PANX3Q96QZ0 392 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 CCDC77Q9BR77 488 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 CCM2Q9BSQ5 444 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 GSDMCQ9BYG8 508 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 EPB41L4BQ9H329 900 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 RHOJQ9H4E5 214 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 PRKAB1Q9Y478 270 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 PSAT1Q9Y617 370 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 PRSS21Q9Y6M0 314 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 CACNA1EQ15878 2313 aa14.98□□□□□ -0.01
SNIP1-202ENST00000468040 C17orf113A0A1B0GUU1 675 aa14.97□□□□□ -0.01
SNIP1-202ENST00000468040 EXOC1LA0A1B0GW35 172 aa14.97□□□□□ -0.01
SNIP1-202ENST00000468040 POP7O75817 140 aaKnown RBP14.97□□□□□ -0.01
SNIP1-202ENST00000468040 PIAS1O75925 651 aa14.97□□□□□ -0.01
SNIP1-202ENST00000468040 PIAS2O75928 621 aa14.97□□□□□ -0.01
SNIP1-202ENST00000468040 ACP5P13686 325 aa14.97□□□□□ -0.01
SNIP1-202ENST00000468040 GABRB3P28472 473 aa14.97□□□□□ -0.01
SNIP1-202ENST00000468040 FMO4P31512 558 aa14.97□□□□□ -0.01
SNIP1-202ENST00000468040 EFTUD2Q15029 972 aaKnown RBP eCLIP14.97□□□□□ -0.01
SNIP1-202ENST00000468040 CTSL3PQ5NE16 218 aa14.97□□□□□ -0.01
SNIP1-202ENST00000468040 PRAMEF14Q5SWL7 426 aa14.97□□□□□ -0.01
SNIP1-202ENST00000468040 GRTP1Q5TC63 336 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms