RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 ZFXP17010 805 aaPredicted RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 PTPN2P17706 415 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 COMTP21964 271 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 NR2F2P24468 414 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 PRDX6P30041 224 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 CDC25CP30307 473 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 STIP1P31948 543 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 GALNSP34059 522 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 TRHRP34981 398 aaPredicted RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 CTNNB1P35222 781 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 RANBP1P43487 201 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 KIR2DL3P43628 341 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 GYG1P46976 350 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 ALDH3B2P48448 385 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 IFNAR2P48551 515 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 FMO5P49326 533 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 NUMBP49757 651 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 CPT1AP50416 773 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 CHN2P52757 468 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 PNLIPRP1P54315 467 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 RNASE9P60153 205 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 YBX1P67809 324 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 DUSP2Q05923 314 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 SCAPQ12770 1279 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 CDC16Q13042 620 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 MSLNQ13421 630 aaPredicted RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 DCTN2Q13561 401 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 KCNC3Q14003 757 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 ARHGEF7Q14155 803 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 ERV3-1Q14264 604 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 DRAP1Q14919 205 aaPredicted RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 SPCS2Q15005 226 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 MORF4L2Q15014 288 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 RCN1Q15293 331 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 SMAD1Q15797 465 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 PLEKHN1Q494U1 663 aaPredicted RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 NRN1LQ496H8 165 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 CTXN3Q4LDR2 81 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 ANKRD20A4Q4UJ75 823 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 PDCD4Q53EL6 469 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 TAF1BQ53T94 588 aaPredicted RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 COLEC12Q5KU26 742 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 UBAP2Q5T6F2 1119 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 OGFRL1Q5TC84 451 aaPredicted RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 SEL1L2Q5TEA6 688 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 FAXCQ5TGI0 409 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 FAM205BPQ63HN1 556 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 TRIM68Q6AZZ1 485 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 SNRNP48Q6IEG0 339 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 INO80CQ6PI98 192 aaPredicted RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 MAMDC4Q6UXC1 1216 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 PHLDB2Q86SQ0 1253 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 KBTBD6Q86V97 674 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 LRRC6Q86X45 466 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 ZNF677Q86XU0 584 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 ERI1Q8IV48 349 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 CCDC28AQ8IWP9 274 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 FAM71AQ8IYT1 594 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 LILRA3Q8N6C8 439 aaPredicted RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 CELF5Q8N6W0 485 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 BANPQ8N9N5 519 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 DNERQ8NFT8 737 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 VN1R2Q8NFZ6 395 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 OR56A3Q8NH54 315 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 CCDC110Q8TBZ0 833 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 SDR42E1Q8WUS8 393 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 WDR60Q8WVS4 1066 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 CPT1BQ92523 772 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 KRT35Q92764 455 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 ARHGEF26Q96DR7 871 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 LRRC46Q96FV0 321 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 DUS3LQ96G46 650 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 LRIG1Q96JA1 1093 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 VCPIP1Q96JH7 1222 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 FAM20AQ96MK3 541 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 TSPAN18Q96SJ8 248 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 DOK1Q99704 481 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 AGPAT1Q99943 283 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 TMEM47Q9BQJ4 181 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 SPATA5L1Q9BVQ7 753 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 CCDC106Q9BWC9 280 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 C1orf43Q9BWL3 253 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 KRTAP9-3Q9BYQ3 159 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 CRNKL1Q9BZJ0 848 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 GPR63Q9BZJ6 419 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 DCLK3Q9C098 648 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 PAIP1Q9H074 479 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 THAP2Q9H0W7 228 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 RANBP17Q9H2T7 1088 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 PRDM13Q9H4Q3 707 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 MROH8Q9H579 483 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 DHX33Q9H6R0 707 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 TBC1D17Q9HA65 648 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 S100A14Q9HCY8 104 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 DDX4Q9NQI0 724 aaKnown RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 PLSCR4Q9NRQ2 329 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 TUBA8Q9NY65 449 aaPredicted RBP3.46□□□□□ -1.86
SORT1-202ENST00000466471 PLA2G3Q9NZ20 509 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 HACD3Q9P035 362 aa3.46□□□□□ -1.86
SORT1-202ENST00000466471 C6orf203Q9P0P8 240 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms