RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 HOOK3Q86VS8 718 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 CCNJLQ8IV13 435 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 ARL14Q8N4G2 192 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 OR10G6Q8NH81 332 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 PEX13Q92968 403 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 SNF8Q96H20 258 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 CCM2Q9BSQ5 444 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 SCNM1Q9BWG6 230 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.43□□□□□ -0.9
PKP4-208ENST00000462335 CCDC68Q9H2F9 335 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 CAAP1Q9H8G2 361 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 PPANQ9NQ55 473 aaKnown RBP9.43□□□□□ -0.9
PKP4-208ENST00000462335 SMOXQ9NWM0 555 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 KCNK4Q9NYG8 393 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 ACSL5Q9ULC5 683 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 RIMKLBQ9ULI2 386 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 VPS9D1Q9Y2B5 631 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 AK5Q9Y6K8 562 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 UBA6A0AVT1 1052 aaPredicted RBP9.42□□□□□ -0.9
PKP4-208ENST00000462335 FAM187AA6NFU0 413 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 H7C0S8 307 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 IFRD1O00458 451 aaPredicted RBP9.42□□□□□ -0.9
PKP4-208ENST00000462335 DNALI1O14645 258 aaPredicted RBP9.42□□□□□ -0.9
PKP4-208ENST00000462335 CHUKO15111 745 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 TTI1O43156 1089 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 GPR39O43194 453 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 AVILO75366 819 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 AP2A2O94973 939 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 VAPBO95292 243 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 RPLP0P05388 317 aaKnown RBP9.42□□□□□ -0.9
PKP4-208ENST00000462335 GSTM1P09488 218 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 F3P13726 295 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 PNLIPP16233 465 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 AMD1P17707 334 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 ACRV1P26436 265 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 GPR3P46089 330 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 MAZP56270 477 aaKnown RBP9.42□□□□□ -0.9
PKP4-208ENST00000462335 ARL4CP56559 192 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 XIAPP98170 497 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 GSTM4Q03013 218 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 HHEXQ03014 270 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 ITIH4Q14624 930 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 KCNJ11Q14654 390 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 MORF4L2Q15014 288 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 BBS9Q3SYG4 887 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 MAP9Q49MG5 647 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 ARMC3Q5W041 872 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 KCTD16Q68DU8 428 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 ARMC6Q6NXE6 501 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 FOXR1Q6PIV2 292 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 RAB44Q7Z6P3 723 aaPredicted RBP9.42□□□□□ -0.9
PKP4-208ENST00000462335 PIM3Q86V86 326 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 JAMLQ86YT9 394 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 SPATA4Q8NEY3 305 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 GPR156Q8NFN8 814 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 CALML6Q8TD86 181 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 CPT1BQ92523 772 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 ZNF669Q96BR6 464 aaPredicted RBP9.42□□□□□ -0.9
PKP4-208ENST00000462335 STAMBPL1Q96FJ0 436 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 NAT9Q9BTE0 207 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 RAB17Q9H0T7 212 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 LRRN3Q9H3W5 708 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 PRDM8Q9NQV8 689 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 SYBUQ9NX95 663 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 TBC1D29Q9UFV1 150 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 SLC2A6Q9UGQ3 507 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 CDC23Q9UJX2 597 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 NEUROG3Q9Y4Z2 214 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 HEBP2Q9Y5Z4 205 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 RPS6KL1Q9Y6S9 549 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 RNF215Q9Y6U7 377 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 COLEC10Q9Y6Z7 277 aa9.42□□□□□ -0.9
PKP4-208ENST00000462335 COL5A1P20908 1838 aaPredicted RBP9.42□□□□□ -0.9
PKP4-208ENST00000462335 SPTBN2O15020 2390 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 TCRBV7S3A2A0A539 114 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 FAM149AA5PLN7 773 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 MGAT4DA6NG13 374 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 OR51F1A6NGY5 319 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 NOBOXO60393 691 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 TCEA3O75764 348 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 GIMD1P0DJR0 217 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 SPINK2P20155 84 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 NMBRP28336 390 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 MAGEA6P43360 314 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 CLCNKAP51800 687 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 DRG2P55039 364 aaKnown RBP9.41□□□□□ -0.9
PKP4-208ENST00000462335 OR1D5P58170 312 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 CCL7P80098 99 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 C2orf54Q08AI8 447 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 TARDBPQ13148 414 aaKnown RBP eCLIP9.41□□□□□ -0.97e-8■■■■□ 21.9
PKP4-208ENST00000462335 MSLNQ13421 630 aaPredicted RBP9.41□□□□□ -0.9
PKP4-208ENST00000462335 HLTFQ14527 1009 aaKnown RBP eCLIP9.41□□□□□ -0.91e-6■■□□□ 12.1
PKP4-208ENST00000462335 PLCL1Q15111 1095 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 TMED2Q15363 201 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 SMAD1Q15797 465 aaKnown RBP9.41□□□□□ -0.9
PKP4-208ENST00000462335 KCTD19Q17RG1 926 aaPredicted RBP9.41□□□□□ -0.9
PKP4-208ENST00000462335 WHAMMP3Q1A5X7 153 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 KHDC1Q4VXA5 237 aaKnown RBP9.41□□□□□ -0.9
PKP4-208ENST00000462335 PHF19Q5T6S3 580 aa9.41□□□□□ -0.9
PKP4-208ENST00000462335 RNF187Q5TA31 235 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms