RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-204	ENST00000461522	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	FAM72A	Q5TYM5	149 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	PLA2G4F	Q68DD2	849 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	TXNDC8	Q6A555	127 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	FAM72D	Q6L9T8	149 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	ATF7IP	Q6VMQ6	1270 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	SLC36A4	Q6YBV0	504 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	LDHAL6A	Q6ZMR3	332 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	KIF6	Q6ZMV9	814 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	SLC26A9	Q7LBE3	791 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	PPP1R42	Q7Z4L9	355 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	NFE4	Q86UQ8	179 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	FAM72B	Q86X60	149 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	CPO	Q8IVL8	374 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	C1orf87	Q8N0U7	546 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	CPXCR1	Q8N123	301 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	NDUFAF2	Q8N183	169 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	ZCCHC9	Q8N567	271 aa	Known RBP	4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	PI4KAP1	Q8N8J0	262 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	BBS10	Q8TAM1	723 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	DNAAF4	Q8WXU2	420 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	ABTB1	Q969K4	478 aa	Predicted RBP	4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	FBXO17	Q96EF6	278 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	CDHR1	Q96JP9	859 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	NYX	Q9GZU5	481 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	INTS2	Q9H0H0	1204 aa	Known RBP	4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	TTYH1	Q9H313	450 aa	Predicted RBP	4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	C20orf141	Q9NUB4	165 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	HCN3	Q9P1Z3	774 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	RALY	Q9UKM9	306 aa	Known RBP	4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	GTF2A1L	Q9UNN4	478 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	GPR52	Q9Y2T5	361 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	FAM96B	Q9Y3D0	163 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	LSM4	Q9Y4Z0	139 aa	Known RBP	4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	UTY	O14607	1347 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	ATP10D	Q9P241	1426 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522		A0A1W2PRQ8	180 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	GAGE10	A6NGK3	116 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	LILRA5	A6NI73	299 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	IGHD	P01880	384 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	TF	P02787	698 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	TPM2	P07951	284 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	GM2A	P17900	193 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	CASQ1	P31415	396 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	PSMC2	P35998	433 aa	Known RBP	4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	CDH15	P55291	814 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	HNRNPH2	P55795	449 aa	Known RBP	4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	GEMIN4	P57678	1058 aa	Known RBP	4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	KRTAP10-12	P60413	245 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	RNPS1	Q15287	305 aa	Known RBP	4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	C2orf68	Q2NKX9	166 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	FAM133B	Q5BKY9	247 aa	Known RBP	4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	BEND3	Q5T5X7	828 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	IRAK1BP1	Q5VVH5	260 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	HIST2H2BC	Q6DN03	193 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	TRNP1	Q6NT89	227 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	RGMB	Q6NW40	437 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	CPLX2	Q6PUV4	134 aa	Known RBP	4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	LRRC8D	Q7L1W4	858 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	KMT5C	Q86Y97	462 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	ZBTB2	Q8N680	514 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	PPHLN1	Q8NEY8	458 aa	Known RBP	4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	DMBX1	Q8NFW5	382 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	DUSP19	Q8WTR2	217 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	NOC3L	Q8WTT2	800 aa	Known RBP	4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	CDCA5	Q96FF9	252 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	HEMGN	Q9BXL5	484 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	BPIFA1	Q9NP55	256 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	MMP25	Q9NPA2	562 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	RIC8A	Q9NPQ8	531 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	SMC4	Q9NTJ3	1288 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	RAI14	Q9P0K7	980 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	CNOT7	Q9UIV1	285 aa	Known RBP	4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	AMDHD2	Q9Y303	409 aa		4.09	□□□□□ -1.75
UBA3-204	ENST00000461522	BRWD3	Q6RI45	1802 aa		4.09	□□□□□ -1.76
UBA3-204	ENST00000461522	CAPN9	O14815	690 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	ABCC4	O15439	1325 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	EDIL3	O43854	480 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	SIPA1L3	O60292	1781 aa	Predicted RBP	4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	ZG16	O60844	167 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	C5	P01031	1676 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	AMBP	P02760	352 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	PCCA	P05165	728 aa	Predicted RBP	4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	FGF5	P12034	268 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	MYL6B	P14649	208 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	ITGA2	P17301	1181 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	DDIT3	P35638	169 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	PGM1	P36871	562 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	FMO5	P49326	533 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	METAP2	P50579	478 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	ZNF131	P52739	623 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	MAP2K1	Q02750	393 aa	Predicted RBP	4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	PPFIA1	Q13136	1202 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	PAPPA	Q13219	1627 aa		4.08	□□□□□ -1.76
UBA3-204	ENST00000461522	TDG	Q13569	410 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms