RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 KCNH4Q9UQ05 1017 aa18.48■□□□□ 0.55
PTPA-223ENST00000452489 ANKRD12Q6UB98 2062 aa18.48■□□□□ 0.55
PTPA-223ENST00000452489 ASPDHA6ND91 283 aa18.48■□□□□ 0.55
PTPA-223ENST00000452489 SLC9A3R1O14745 358 aaPredicted RBP18.48■□□□□ 0.55
PTPA-223ENST00000452489 RGS7P49802 495 aa18.48■□□□□ 0.55
PTPA-223ENST00000452489 DNAJB13P59910 316 aa18.48■□□□□ 0.55
PTPA-223ENST00000452489 FADDQ13158 208 aa18.48■□□□□ 0.55
PTPA-223ENST00000452489 BNIPLQ7Z465 357 aa18.48■□□□□ 0.55
PTPA-223ENST00000452489 DCP1BQ8IZD4 617 aaKnown RBP18.48■□□□□ 0.55
PTPA-223ENST00000452489 CACTIN-AS1Q8N1I8 211 aa18.48■□□□□ 0.55
PTPA-223ENST00000452489 GIMAP1Q8WWP7 306 aa18.48■□□□□ 0.55
PTPA-223ENST00000452489 BFARQ9NZS9 450 aa18.48■□□□□ 0.55
PTPA-223ENST00000452489 A8MT66 165 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 MFSD11O43934 449 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 KCNJ13O60928 360 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 COL6A1P12109 1028 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 SDC4P31431 198 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 RAB10P61026 200 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 IFRD2Q12894 506 aaPredicted RBP18.47■□□□□ 0.55
PTPA-223ENST00000452489 PLEKHG6Q3KR16 790 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 PYROXD2Q8N2H3 581 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 TMEM199Q8N511 208 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 ZNF566Q969W8 418 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 XYLT2Q9H1B5 865 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 KCNN2Q9H2S1 579 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 DUSP21Q9H596 190 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 INTS7Q9NVH2 962 aaKnown RBP18.47■□□□□ 0.55
PTPA-223ENST00000452489 GLTPQ9NZD2 209 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 PCDHB14Q9Y5E9 798 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 CLDN24A6NM45 220 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 BCKDKO14874 412 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 MDM4O15151 490 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 RAD17O75943 681 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 PSAPP07602 524 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 GOT1P17174 413 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 ITGA2P17301 1181 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 B2MP61769 119 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 FAPQ12884 760 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 DENND6AQ8IWF6 608 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 CCNYQ8ND76 341 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 TMEM143Q96AN5 459 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 TMEM80Q96HE8 168 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 KCTD15Q96SI1 283 aaPredicted RBP18.47■□□□□ 0.55
PTPA-223ENST00000452489 ACOX2Q99424 681 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 SLC52A3Q9NQ40 469 aa18.47■□□□□ 0.55
PTPA-223ENST00000452489 EEF2KO00418 725 aaKnown RBP18.46■□□□□ 0.55
PTPA-223ENST00000452489 PDGFAP04085 211 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 RAP2AP10114 183 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 GADD45AP24522 165 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 MAPK12P53778 367 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 MAP3K7CLP57077 242 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 CTBP1Q13363 440 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 PRSS36Q5K4E3 855 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 GJC2Q5T442 439 aaPredicted RBP18.46■□□□□ 0.55
PTPA-223ENST00000452489 SLC26A9Q7LBE3 791 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 TP53INP2Q8IXH6 220 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 AMER2Q8N7J2 671 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 ZMIZ2Q8NF64 920 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 NPLOC4Q8TAT6 608 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 ELOVL4Q9GZR5 314 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 NXF2Q9GZY0 626 aaKnown RBP18.46■□□□□ 0.55
PTPA-223ENST00000452489 UBIAD1Q9Y5Z9 338 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 ADAMTSL1Q8N6G6 1762 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 KCNK1O00180 336 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 CYP7B1O75881 506 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 CYBBP04839 570 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 IL12RB1P42701 662 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 SOX9P48436 509 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 NKX3-2P78367 333 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 PTPN11Q06124 597 aaPredicted RBP18.46■□□□□ 0.55
PTPA-223ENST00000452489 CSHL1Q14406 222 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 SPANXN2Q5MJ10 180 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 JADE1Q6IE81 842 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 PID1Q7Z2X4 250 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 TMEM179BQ7Z7N9 219 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 BRSK2Q8IWQ3 736 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 DTWD1Q8N5C7 304 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 ZNF540Q8NDQ6 660 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 ITFG1Q8TB96 612 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 TEX37Q96LM6 180 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 TEX13BQ9BXU2 312 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.46■□□□□ 0.552e-6■■■■□ 21.9
PTPA-223ENST00000452489 ZNF304Q9HCX3 659 aa18.46■□□□□ 0.55
PTPA-223ENST00000452489 OR2A25A4D2G3 310 aa18.45■□□□□ 0.54
PTPA-223ENST00000452489 LOC110117498-PIK3R3F6TDL0 507 aa18.45■□□□□ 0.54
PTPA-223ENST00000452489 TSPAN4O14817 238 aa18.45■□□□□ 0.54
PTPA-223ENST00000452489 MITFO75030 526 aaPredicted RBP18.45■□□□□ 0.54
PTPA-223ENST00000452489 IPO13O94829 963 aaKnown RBP18.45■□□□□ 0.54
PTPA-223ENST00000452489 SNX4O95219 450 aa18.45■□□□□ 0.54
PTPA-223ENST00000452489 CST1P01037 141 aa18.45■□□□□ 0.54
PTPA-223ENST00000452489 HOXD8P13378 290 aaPredicted RBP18.45■□□□□ 0.54
PTPA-223ENST00000452489 CYP4B1P13584 511 aa18.45■□□□□ 0.54
PTPA-223ENST00000452489 STMN1P16949 149 aa18.45■□□□□ 0.54
PTPA-223ENST00000452489 RYKP34925 604 aa18.45■□□□□ 0.54
PTPA-223ENST00000452489 UGT2B10P36537 528 aa18.45■□□□□ 0.54
PTPA-223ENST00000452489 SLC26A3P40879 764 aa18.45■□□□□ 0.54
PTPA-223ENST00000452489 FOXM1Q08050 763 aa18.45■□□□□ 0.54
PTPA-223ENST00000452489 SH3BP5LQ7L8J4 393 aa18.45■□□□□ 0.54
PTPA-223ENST00000452489 TBCBQ99426 244 aa18.45■□□□□ 0.54
PTPA-223ENST00000452489 PDLIM7Q9NR12 457 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms