RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 RNF112Q9ULX5 631 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 COL4A5P29400 1685 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 PLXNA1Q9UIW2 1896 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CCDC187A0A096LP49 1063 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 HCRTO43612 131 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 KLRC4O43908 158 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 WBP4O75554 376 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 GSRP00390 522 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 NUDT17P0C025 328 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC35G6P0C7Q6 338 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 MMP8P22894 467 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 STK19P49842 368 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 RAD23AP54725 363 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 RHDQ02161 417 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 BTKQ06187 659 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 BIKQ13323 160 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZC3H12BQ5HYM0 836 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 ATAD3BQ5T9A4 648 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 ANKRD42Q8N9B4 389 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 C3orf58Q8NDZ4 430 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 APOBEC4Q8WW27 367 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 TUBGCP5Q96RT8 1024 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 RBM15Q96T37 977 aaKnown RBP eCLIP5.58□□□□□ -1.522e-6■■■□□ 16.7
CDC42BPA-209ENST00000448940 FAM118BQ9BPY3 351 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 RIOK2Q9BVS4 552 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 TUBB1Q9H4B7 451 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 GLOD4Q9HC38 313 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 PTPRHQ9HD43 1115 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.58□□□□□ -1.522e-6■■■■■ 39.6
CDC42BPA-209ENST00000448940 PPT2Q9UMR5 302 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 SUFUQ9UMX1 484 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 CCT8L1PA6NM43 557 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC7A4O43246 635 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 SPAG6O75602 509 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 RECQL5O94762 991 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 PRKAG1P54619 331 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 DLX2Q07687 328 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 UBAP2LQ14157 1087 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 SYPL2Q5VXT5 272 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 SRFBP1Q8NEF9 429 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 OR4K17Q8NGC6 315 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 TFAP2BQ92481 460 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 SNF8Q96H20 258 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 FEM1AQ9BSK4 669 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC4A5Q9BY07 1137 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 METTL7AQ9H8H3 244 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 SPTBN1Q01082 2364 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZSCAN9O15535 394 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 KLK7P49862 253 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 HHEXQ03014 270 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 CSHL1Q14406 222 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 AGAP9Q5VTM2 703 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 RBM43Q6ZSC3 357 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 GALNT7Q86SF2 657 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 DDIASQ8IXT1 998 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 RDH11Q8TC12 318 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 GRAMD1AQ96CP6 724 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 LOXL4Q96JB6 756 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 DUSP9Q99956 384 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZNF559Q9BR84 538 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 ANKHQ9HCJ1 492 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 RAXQ9Y2V3 346 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 hCG_2014768A0A024R1R8 64 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 IGLON5A6NGN9 336 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 APOC4-APOC2K7ER74 178 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 TNFRSF10BO14763 440 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 B4GALT2O60909 372 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 SCN2BO60939 215 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 OR2B3O76000 313 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 APOC2P02655 101 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 PIK3CGP48736 1102 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 CLCNKAP51800 687 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 PMS1P54277 932 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 DIO3P55073 304 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 IRF8Q02556 426 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 SEMA3AQ14563 771 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 PARP6Q2NL67 630 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 LRRC23Q53EV4 343 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 METTL21CQ5VZV1 264 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 NEK5Q6P3R8 708 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 MDGA1Q8NFP4 955 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 DEFB126Q9BYW3 111 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 ATP13A2Q9NQ11 1180 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 GPR83Q9NYM4 423 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 MGAT4DA6NG13 374 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 M0R2N6 131 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 DYNC1I1O14576 645 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 PRMT5O14744 637 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 ALOX15BO15296 676 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 AQP9O43315 295 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 CCNT2O60583 730 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 VAPBO95292 243 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 MT-ND5P03915 603 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 TROVE2P10155 538 aaKnown RBP eCLIP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 KDELR1P24390 212 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 MC4RP32245 332 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 GPD2P43304 727 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 NUP107P57740 925 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 IL2P60568 153 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 ECH1Q13011 328 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms