RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 PID1Q7Z2X4 250 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 PHYKPLQ8IUZ5 450 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 BBC3Q96PG8 261 aaPredicted RBP8.66□□□□□ -1.02
USP6NL-203ENST00000443016 CARD6Q9BX69 1037 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 OSGEPL1Q9H4B0 414 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 RAD18Q9NS91 495 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 FAM153AQ9UHL3 310 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 KCNK6Q9Y257 313 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 ZNF711Q9Y462 761 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 OAS3Q9Y6K5 1087 aaKnown RBP8.66□□□□□ -1.02
USP6NL-203ENST00000443016 PPM1DO15297 605 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 PHF2O75151 1096 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 SLU7O95391 586 aaKnown RBP8.65□□□□□ -1.02
USP6NL-203ENST00000443016 ZFP36L1Q07352 338 aaKnown RBP8.65□□□□□ -1.02
USP6NL-203ENST00000443016 COL9A2Q14055 689 aaPredicted RBP8.65□□□□□ -1.02
USP6NL-203ENST00000443016 PRKD1Q15139 912 aaPredicted RBP8.65□□□□□ -1.02
USP6NL-203ENST00000443016 NKAIN2Q5VXU1 208 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 CCDC81Q6ZN84 652 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 CLEC14AQ86T13 490 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 C17orf82Q86X59 251 aaPredicted RBP8.65□□□□□ -1.02
USP6NL-203ENST00000443016 ZNF761Q86XN6 746 aaPredicted RBP8.65□□□□□ -1.02
USP6NL-203ENST00000443016 RCBTB1Q8NDN9 531 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 SPATA4Q8NEY3 305 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 GDAP1Q8TB36 358 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 SLC37A2Q8TED4 501 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 GRK7Q8WTQ7 553 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 HTR3CQ8WXA8 447 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 TTC25Q96NG3 672 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 TRIB3Q96RU7 358 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 NUDT22Q9BRQ3 303 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 OR2AG1Q9H205 316 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 SEMA6CQ9H3T2 930 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 RMI1Q9H9A7 625 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 FEZ2Q9UHY8 353 aaPredicted RBP8.65□□□□□ -1.02
USP6NL-203ENST00000443016 PCDHGA7Q9Y5G6 932 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 ZNF462Q96JM2 2506 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 H7C0C1 242 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 GRID2O43424 1007 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 NFKB1P19838 968 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 MPSTP25325 297 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 ATP5OP48047 213 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 FNTAP49354 379 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 HHEXQ03014 270 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 ADCY2Q08462 1091 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 NFATC2Q13469 925 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 TAF1BQ53T94 588 aaPredicted RBP8.65□□□□□ -1.02
USP6NL-203ENST00000443016 ARMC3Q5W041 872 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 TMPRSS9Q7Z410 1059 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 ZNF438Q7Z4V0 828 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 CDKL3Q8IVW4 592 aaPredicted RBP8.65□□□□□ -1.02
USP6NL-203ENST00000443016 SLITRK4Q8IW52 837 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 SLC25A41Q8N5S1 370 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 GPR26Q8NDV2 337 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 OR10G6Q8NH81 332 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 SLC39A7Q92504 469 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 MAGOHBQ96A72 148 aaKnown RBP8.65□□□□□ -1.02
USP6NL-203ENST00000443016 EID2BQ96D98 161 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 VAT1Q99536 393 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 FSD1LQ9BXM9 530 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 AP1M1Q9BXS5 423 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 TRIM39Q9HCM9 518 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 BPIFA1Q9NP55 256 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 SMARCAL1Q9NZC9 954 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 ATXN10Q9UBB4 475 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 CNOT6Q9ULM6 557 aaKnown RBP8.65□□□□□ -1.02
USP6NL-203ENST00000443016 PCDHB11Q9Y5F2 797 aa8.65□□□□□ -1.02
USP6NL-203ENST00000443016 NUAK1O60285 661 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 GAS8O95995 478 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 SLC2A4P14672 509 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 CD1CP29017 333 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 CSTF2P33240 577 aaKnown RBP eCLIP8.64□□□□□ -1.03
USP6NL-203ENST00000443016 WNT3AP56704 352 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 GPLD1P80108 840 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 OTUD4Q01804 1114 aaKnown RBP8.64□□□□□ -1.03
USP6NL-203ENST00000443016 C2orf54Q08AI8 447 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 WASHC5Q12768 1159 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 NOMO1Q15155 1222 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 SLC14A2Q15849 920 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 CCNG2Q16589 344 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 INSCQ1MX18 579 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 CRTC3Q6UUV7 619 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 TMC3Q7Z5M5 1100 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 SFRP1Q8N474 314 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 TRAM1L1Q8N609 369 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 IPMKQ8NFU5 416 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 ACTL9Q8TC94 416 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 GLYATL1Q969I3 302 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 KLC4Q9NSK0 619 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 TBC1D29Q9UFV1 150 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 DNAJC16Q9Y2G8 782 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 IGHV1OR21-1A0A087WYE8 117 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 IGHV5-10-1A0A0J9YXX1 117 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 HACD1B0YJ81 288 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 AURKAO14965 403 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 NVLO15381 856 aaKnown RBP8.64□□□□□ -1.03
USP6NL-203ENST00000443016 DUX1O43812 170 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 MTX2O75431 263 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 CDK14O94921 469 aa8.64□□□□□ -1.03
USP6NL-203ENST00000443016 ZNF8P17098 575 aaPredicted RBP8.64□□□□□ -1.03
USP6NL-203ENST00000443016 BPIP17213 487 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms