RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 CYHR1Q6ZMK1 362 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 GLRX5Q86SX6 157 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 RBM23Q86U06 439 aaKnown RBP13.6□□□□□ -0.23
LINC02048-201ENST00000440556 HID1Q8IV36 788 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 CEP97Q8IW35 865 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 CCDC117Q8IWD4 279 aaPredicted RBP13.6□□□□□ -0.23
LINC02048-201ENST00000440556 REM2Q8IYK8 340 aaPredicted RBP13.6□□□□□ -0.23
LINC02048-201ENST00000440556 MICU2Q8IYU8 434 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.6□□□□□ -0.23
LINC02048-201ENST00000440556 CCNYQ8ND76 341 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 OR52E4Q8NGH9 312 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 DNAJB14Q8TBM8 379 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 NCLNQ969V3 563 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 CDHR1Q96JP9 859 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 CCDC115Q96NT0 180 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 VAT1Q99536 393 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 SMOC2Q9H3U7 446 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 GORASP2Q9H8Y8 452 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 FBRSL1Q9HCM7 1045 aaKnown RBP13.6□□□□□ -0.23
LINC02048-201ENST00000440556 SETD4Q9NVD3 440 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 DNMT3LQ9UJW3 386 aa13.6□□□□□ -0.23
LINC02048-201ENST00000440556 DICER1Q9UPY3 1922 aaKnown RBP13.59□□□□□ -0.23
LINC02048-201ENST00000440556 COL11A2P13942 1736 aaPredicted RBP13.59□□□□□ -0.23
LINC02048-201ENST00000440556 OR2A25A4D2G3 310 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 KRT87PA6NCN2 255 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 GNGT2O14610 69 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 AIREO43918 545 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 MFSD11O43934 449 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 TRIM3O75382 744 aaPredicted RBP13.59□□□□□ -0.23
LINC02048-201ENST00000440556 PGK2P07205 417 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 CD6P30203 668 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 PPP3CCP48454 512 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 GTF2A2P52657 109 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 CDH8P55286 799 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 CDH13P55290 713 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 HUNKP57058 714 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 JAG1P78504 1218 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 IL5RAQ01344 420 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 RCAN2Q14206 197 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 PLA2G4EQ3MJ16 856 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 SEZ6Q53EL9 994 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 PYCR3Q53H96 274 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 PCID2Q5JVF3 399 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 CERCAMQ5T4B2 595 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 PIK3R6Q5UE93 754 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 TIGD3Q6B0B8 471 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 JADE1Q6IE81 842 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 NT5DC4Q86YG4 428 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 ST13P5Q8NFI4 369 aaPredicted RBP13.59□□□□□ -0.23
LINC02048-201ENST00000440556 KHSRPQ92945 711 aaKnown RBP eCLIP13.59□□□□□ -0.23
LINC02048-201ENST00000440556 TMEM143Q96AN5 459 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 OMA1Q96E52 524 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 HSFY1Q96LI6 401 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 TAAR1Q96RJ0 339 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 PDCD2LQ9BRP1 358 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 SMURF2Q9HAU4 748 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 PXMP2Q9NR77 195 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 NUDT5Q9UKK9 219 aa13.59□□□□□ -0.23
LINC02048-201ENST00000440556 H3BMM5 538 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 hCG_2039718K7EN88 272 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 IFRD1O00458 451 aaPredicted RBP13.58□□□□□ -0.23
LINC02048-201ENST00000440556 NFIBO00712 420 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 STX7O15400 261 aaKnown RBP13.58□□□□□ -0.23
LINC02048-201ENST00000440556 EGFRP00533 1210 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 CST1P01037 141 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 SERPINF2P08697 491 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 GOT1P17174 413 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 NMBRP28336 390 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 SOX6P35712 828 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 PIGAP37287 484 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 MAP2K4P45985 399 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 ORC1Q13415 861 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 TRIP4Q15650 581 aaPredicted RBP13.58□□□□□ -0.23
LINC02048-201ENST00000440556 RABL3Q5HYI8 236 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 STRIP1Q5VSL9 837 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 KIAA0319Q5VV43 1072 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 ABHD15Q6UXT9 468 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 CREB3L2Q70SY1 520 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 EFL1Q7Z2Z2 1120 aaKnown RBP13.58□□□□□ -0.23
LINC02048-201ENST00000440556 NECAB2Q7Z6G3 386 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 PHYKPLQ8IUZ5 450 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 CITED4Q96RK1 184 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 SGIP1Q9BQI5 828 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 PRDM12Q9H4Q4 367 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 TNFRSF12AQ9NP84 129 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 B3GNT2Q9NY97 397 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 STOML2Q9UJZ1 356 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 TSPAN16Q9UKR8 245 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 FZD10Q9ULW2 581 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 GPR45Q9Y5Y3 372 aa13.58□□□□□ -0.23
LINC02048-201ENST00000440556 ATP6AP2A0A1C7CYW4 349 aa13.58□□□□□ -0.24
LINC02048-201ENST00000440556 CLRN2A0PK11 232 aa13.58□□□□□ -0.24
LINC02048-201ENST00000440556 ZNF780AO75290 641 aaPredicted RBP13.58□□□□□ -0.24
LINC02048-201ENST00000440556 MT-ND1P03886 318 aa13.58□□□□□ -0.24
LINC02048-201ENST00000440556 MT-ND2P03891 347 aa13.58□□□□□ -0.24
LINC02048-201ENST00000440556 CAPN1P07384 714 aa13.58□□□□□ -0.24
LINC02048-201ENST00000440556 DDX5P17844 614 aaKnown RBP13.58□□□□□ -0.24
LINC02048-201ENST00000440556 PAMP19021 973 aa13.58□□□□□ -0.24
LINC02048-201ENST00000440556 GGT1P19440 569 aa13.58□□□□□ -0.24
LINC02048-201ENST00000440556 PTPN3P26045 913 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms