RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 LIPT2A6NK58 231 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 AKR1B15C9JRZ8 316 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 H3BQ06 376 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 BMPR1BO00238 502 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 NDUFB4O95168 129 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 PMS2P2O95744 297 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 CLTBP09497 229 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 ZNF182P17025 639 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 SSTR2P30874 369 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 CASP2P42575 452 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 GALCP54803 685 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 NAP1L1P55209 391 aaKnown RBP3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 DDR1Q08345 913 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 CSTF3Q12996 717 aaKnown RBP3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 SNTA1Q13424 505 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 ZSCAN23Q3MJ62 389 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 CXorf66Q5JRM2 361 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 ANKRD54Q6NXT1 300 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 MZT2BQ6NZ67 158 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 NCEH1Q6PIU2 408 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 USP43Q70EL4 1123 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 NAGSQ8N159 534 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 SCCPDHQ8NBX0 429 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 OR14L1PQ8NHC6 308 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 SCFD2Q8WU76 684 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 SORCS1Q8WY21 1168 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 TMEM47Q9BQJ4 181 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 STRA6Q9BX79 667 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 GHITMQ9H3K2 345 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 MUC13Q9H3R2 512 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 RETREG1Q9H6L5 497 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 SH2D4AQ9H788 454 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 KAT14Q9H8E8 782 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 HCFC1R1Q9NWW0 138 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 SMARCAL1Q9NZC9 954 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 ABI3Q9P2A4 366 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 ZNF215Q9UL58 517 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 CDC14AQ9UNH5 594 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 ERVK-11Q9UQG0 969 aa3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 R3HDM2Q9Y2K5 976 aaKnown RBP3.3□□□□□ -1.88
HMGB3P12-201ENST00000438745 BRCA1P38398 1863 aaKnown RBP3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 UTYO14607 1347 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 SCN4AP35499 1836 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 hDV102S1A0JD36 115 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 A6NCN8 305 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 MYO1GB0I1T2 1018 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 TAF4O00268 1085 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 VCYO14598 125 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 ZIC3O60481 467 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 IPO7O95373 1038 aaKnown RBP3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 IGLV2-11P01706 119 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 HOXB5P09067 269 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 GPTP24298 496 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 CHATP28329 748 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 PIK3CAP42336 1068 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 ZNF155Q12901 538 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 OLIG2Q13516 323 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 EFNB3Q15768 340 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 USP50Q70EL3 339 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 LINGO2Q7L985 606 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 EXOC3L1Q86VI1 746 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 ZC3HC1Q86WB0 502 aaKnown RBP3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 ARHGAP12Q8IWW6 846 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 DSELQ8IZU8 1212 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 GPC2Q8N158 579 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 AGBL3Q8NEM8 1001 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 CREB3L4Q8TEY5 395 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 POMGNT1Q8WZA1 660 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 RND1Q92730 232 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 C1orf74Q96LT6 269 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 TMEM68Q96MH6 324 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 IL17FQ96PD4 163 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 MAP7D2Q96T17 732 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 PRO3102Q9H379 93 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 SMARCAD1Q9H4L7 1026 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 UBTD1Q9HAC8 227 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 EBF2Q9HAK2 575 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 MKKSQ9NPJ1 570 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 HINT3Q9NQE9 182 aaKnown RBP3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 MDFICQ9P1T7 246 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 SLC9A2Q9UBY0 812 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 ADD3Q9UEY8 706 aaKnown RBP3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 TBC1D29Q9UFV1 150 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 FBXO2Q9UK22 296 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 GPR34Q9UPC5 381 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 LYVE1Q9Y5Y7 322 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 STON1Q9Y6Q2 735 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 DOT1LQ8TEK3 1739 aa3.29□□□□□ -1.88
HMGB3P12-201ENST00000438745 COL6A3P12111 3177 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 KIF1BO60333 1816 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 SAA2-SAA4A0A096LPE2 208 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 A0A1W2PRG0 241 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 HMGB1P1B2RPK0 211 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 PRAC2D3DTV9 90 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 BUB3O43684 328 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 GJB3O75712 270 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 SLC25A12O75746 678 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 CAMTA2O94983 1202 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 CLDN14O95500 239 aa3.28□□□□□ -1.88
HMGB3P12-201ENST00000438745 PLGP00747 810 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms