RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 ZNF395Q9H8N7 513 aaPredicted RBP20.21■□□□□ 0.83
AP1S3-205ENST00000415298 EFCAB1Q9HAE3 211 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 ABHD14A-ACY1A0A1B0GW23 586 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 LINC00862A6NCI5 91 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 SNNO75324 88 aaPredicted RBP20.2■□□□□ 0.82
AP1S3-205ENST00000415298 ZMPSTE24O75844 475 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 ITGB1P05556 798 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 HSMCR30P0CW71 290 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 SLC2A3P11169 496 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 HOXA1P49639 335 aaPredicted RBP20.2■□□□□ 0.82
AP1S3-205ENST00000415298 GCNT1Q02742 428 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 MTX3Q5HYI7 312 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 STK32CQ86UX6 486 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 ABI1Q8IZP0 508 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 SLC7A14Q8TBB6 771 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 ZFAND1Q8TCF1 268 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 PHF21AQ96BD5 680 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 MSANTD3Q96H12 275 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 KCTD14Q9BQ13 255 aaPredicted RBP20.2■□□□□ 0.82
AP1S3-205ENST00000415298 TRPM5Q9NZQ8 1165 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 NPPAP01160 153 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 PBX3P40426 434 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 STAT1P42224 750 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 PLA2G16P53816 162 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 MFAP3P55082 362 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 BPIFB3P59826 476 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 LILRA4P59901 499 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 DAB2P98082 770 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 LTB4RQ15722 352 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 CHI3L2Q15782 390 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 UPP1Q16831 310 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 HMBOX1Q6NT76 420 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 TOP1MTQ969P6 601 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 SIRPGQ9P1W8 387 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 DTX4Q9Y2E6 619 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 PCDHGA7Q9Y5G6 932 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 AUP1Q9Y679 476 aa20.2■□□□□ 0.82
AP1S3-205ENST00000415298 LINC00587B1AMM8 73 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 PROS1P07225 676 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 CYP11B1P15538 503 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 ACO1P21399 889 aaKnown RBP20.19■□□□□ 0.82
AP1S3-205ENST00000415298 ME2P23368 584 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 TPMTP51580 245 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 ABCE1P61221 599 aaKnown RBP20.19■□□□□ 0.82
AP1S3-205ENST00000415298 SGCAQ16586 387 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 RETSATQ6NUM9 610 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 SLC16A12Q6ZSM3 486 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 PHC2Q8IXK0 858 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 PACRGLQ8N7B6 248 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 MCUQ8NE86 351 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 OR52H1Q8NGJ2 320 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 PHF10Q8WUB8 498 aaKnown RBP20.19■□□□□ 0.82
AP1S3-205ENST00000415298 ATP6V1E2Q96A05 226 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 NIF3L1Q9GZT8 377 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 LRRC40Q9H9A6 602 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 CCDC59Q9P031 241 aaKnown RBP20.19■□□□□ 0.82
AP1S3-205ENST00000415298 PLLPQ9Y342 182 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 SNX13Q9Y5W8 968 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 C17orf113A0A1B0GUU1 675 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 KRT87PA6NCN2 255 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 A8MV72 311 aaPredicted RBP20.19■□□□□ 0.82
AP1S3-205ENST00000415298 INPPL1O15357 1258 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 GATCO43716 136 aaKnown RBP20.19■□□□□ 0.82
AP1S3-205ENST00000415298 APOC1P02654 83 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 FGBP02675 491 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 CYP2A6P11509 494 aaPredicted RBP20.19■□□□□ 0.82
AP1S3-205ENST00000415298 ZNF250P15622 560 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 MERTKQ12866 999 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 ORC1Q13415 861 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 TUSC3Q13454 348 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 CES4AQ5XG92 561 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 PDPK2PQ6A1A2 396 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 LINC00523Q86TU6 105 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 NPAS4Q8IUM7 802 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 SCUBE3Q8IX30 993 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 SHC3Q92529 594 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 MNTQ99583 582 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 FUNDC2Q9BWH2 189 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 UCK2Q9BZX2 261 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 CD320Q9NPF0 282 aa20.19■□□□□ 0.82
AP1S3-205ENST00000415298 KPNA7A9QM74 516 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 B3GAT3O94766 335 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 PRIM2P49643 509 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 SNX16P57768 344 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 MESDQ14696 234 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 SLC36A3Q495N2 470 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 TMEM240Q5SV17 173 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 GDPD3Q7L5L3 318 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 PLCZ1Q86YW0 608 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 PHOSPHO2Q8TCD6 241 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 PROX1Q92786 737 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 AHCYL2Q96HN2 611 aaKnown RBP20.18■□□□□ 0.82
AP1S3-205ENST00000415298 GAL3ST1Q99999 423 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 LTBP2Q14767 1821 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 FNDC1Q4ZHG4 1894 aaPredicted RBP20.18■□□□□ 0.82
AP1S3-205ENST00000415298 HCRTO43612 131 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 SLC4A1P02730 911 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 TRAPPC2P0DI81 140 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 TRAPPC2BP0DI82 140 aa20.18■□□□□ 0.82
AP1S3-205ENST00000415298 NCF2P19878 526 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms