RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 SYN1P17600 705 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 PPIGQ13427 754 aaKnown RBP eCLIP19.63■□□□□ 0.731e-10■■□□□ 11.6
CCDC47-202ENST00000403162 BTG3Q14201 252 aaPredicted RBP19.63■□□□□ 0.73
CCDC47-202ENST00000403162 CPNE9Q8IYJ1 553 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 OR13F1Q8NGS4 319 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 OR4L1Q8NH43 312 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 BIRC7Q96CA5 298 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 SEMA4BQ9NPR2 832 aaPredicted RBP19.63■□□□□ 0.73
CCDC47-202ENST00000403162 TDRKHQ9Y2W6 561 aaKnown RBP19.63■□□□□ 0.73
CCDC47-202ENST00000403162 IGLV3-10A0A075B6K4 115 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 GRXCR2A6NFK2 248 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 CCDC85CA6NKD9 419 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 CNTN5O94779 1100 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 C1RP00736 705 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 ENO2P09104 434 aaPredicted RBP19.62■□□□□ 0.73
CCDC47-202ENST00000403162 ZNF12P17014 697 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 HRH2P25021 359 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 POLR2JP52435 117 aaKnown RBP19.62■□□□□ 0.73
CCDC47-202ENST00000403162 ECT2LQ008S8 904 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 EMX2Q04743 252 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 FPGSQ05932 587 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 IL10RBQ08334 325 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 ALFQ53S48 1182 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 MS4A13Q5J8X5 152 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 NANOGP8Q6NSW7 305 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 ZNF773Q6PK81 442 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 OTOP2Q7RTS6 562 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 BRSK1Q8TDC3 778 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 BLOC1S5Q8TDH9 187 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 NANOGQ9H9S0 305 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 ZIM2Q9NZV7 527 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 GMIPQ9P107 970 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 SH3GLB1Q9Y371 365 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 TIMM22Q9Y584 194 aa19.62■□□□□ 0.73
CCDC47-202ENST00000403162 LCHNA4D1U4 455 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 SYCE1LA8MT33 242 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 STX16O14662 325 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 NOL3O60936 208 aaKnown RBP19.61■□□□□ 0.73
CCDC47-202ENST00000403162 ECI2O75521 394 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 CHEK2O96017 543 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 UROSP10746 265 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 CD247P20963 164 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 PAX3P23760 479 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 TMBIM6P55061 237 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 UFM1P61960 85 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 DEFB103AP81534 67 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 DSC1Q08554 894 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 PTPRCAPQ14761 206 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 CBX2Q14781 532 aaPredicted RBP19.61■□□□□ 0.73
CCDC47-202ENST00000403162 CRY1Q16526 586 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 MOGQ16653 247 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 FUT11Q495W5 492 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 ANKRD26P1Q6NSI1 321 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 RIMKLAQ8IXN7 391 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 OR13C4Q8NGS5 318 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 HASPINQ8TF76 798 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 RSPH1Q8WYR4 309 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 ISG20Q96AZ6 181 aaKnown RBP19.61■□□□□ 0.73
CCDC47-202ENST00000403162 RPL10LQ96L21 214 aaKnown RBP19.61■□□□□ 0.73
CCDC47-202ENST00000403162 TMEM74Q96NL1 305 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 CHID1Q9BWS9 393 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 LRRC3Q9BY71 257 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 NAA50Q9GZZ1 169 aaKnown RBP19.61■□□□□ 0.73
CCDC47-202ENST00000403162 SOX17Q9H6I2 414 aaPredicted RBP19.61■□□□□ 0.73
CCDC47-202ENST00000403162 FAM234BA2RU67 622 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 H0Y858 1186 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 FOXD2O60548 495 aaPredicted RBP19.61■□□□□ 0.73
CCDC47-202ENST00000403162 SNX2O60749 519 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 EFCAB14O75071 495 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 ESRRBO95718 433 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 EPOP01588 193 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 ALBP02768 609 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 CDH1P12830 882 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 PBX3P40426 434 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 OR1G1P47890 313 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 CD97P48960 835 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 WDR5P61964 334 aaKnown RBP19.61■□□□□ 0.73
CCDC47-202ENST00000403162 ERVK-8P63133 956 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 NEDD8Q15843 81 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 TBPL2Q6SJ96 375 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 PDPRQ8NCN5 879 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 PLEKHA8Q96JA3 519 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 COX4I2Q96KJ9 171 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 PALMDQ9NP74 551 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 PFDN4Q9NQP4 134 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 TLR9Q9NR96 1032 aa19.61■□□□□ 0.73
CCDC47-202ENST00000403162 PLXNA3P51805 1871 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 KLK8O60259 260 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 RHOBTB1O94844 696 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 MLYCDO95822 493 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 MBL2P11226 248 aaPredicted RBP19.6■□□□□ 0.73
CCDC47-202ENST00000403162 C21orf59P57076 290 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 TBX4P57082 545 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 RAD51Q06609 339 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 SFSWAPQ12872 951 aaKnown RBP19.6■□□□□ 0.73
CCDC47-202ENST00000403162 NFATC3Q12968 1075 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 PLCL1Q15111 1095 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 SETMARQ53H47 684 aaPredicted RBP19.6■□□□□ 0.73
CCDC47-202ENST00000403162 PYCR3Q53H96 274 aa19.6■□□□□ 0.73
CCDC47-202ENST00000403162 PAQR3Q6TCH7 311 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms