RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 RNASEH2AO75792 299 aaKnown RBP18.33■□□□□ 0.53
USP48-204ENST00000400301 CDK14O94921 469 aa18.33■□□□□ 0.53
USP48-204ENST00000400301 ITPKAP23677 461 aa18.33■□□□□ 0.53
USP48-204ENST00000400301 ABRQ12979 859 aa18.33■□□□□ 0.53
USP48-204ENST00000400301 CD99L2Q8TCZ2 262 aa18.33■□□□□ 0.53
USP48-204ENST00000400301 MIEF1Q9NQG6 463 aa18.33■□□□□ 0.53
USP48-204ENST00000400301 OAZ3Q9UMX2 235 aa18.33■□□□□ 0.53
USP48-204ENST00000400301 A6NHS1 94 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 UGT1A6P19224 532 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 UGT1A1P22309 533 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 UGT1A4P22310 534 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 UGT1A3P35503 534 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 UGT1A5P35504 534 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 RPIAP49247 311 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 GSK3BP49841 420 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 DIO3P55073 304 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 SPIDRQ14159 915 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 SLC44A4Q53GD3 710 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 UNC50Q53HI1 259 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 ERAP2Q6P179 960 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 METTL3Q86U44 580 aaKnown RBP18.33■□□□□ 0.52
USP48-204ENST00000400301 RASAL3Q86YV0 1011 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 OR10A6Q8NH74 314 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 C2orf15Q8WU43 125 aaKnown RBP18.33■□□□□ 0.52
USP48-204ENST00000400301 SLC47A1Q96FL8 570 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 OSBPL6Q9BZF3 934 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 SCHIP1Q9P0W5 487 aaPredicted RBP18.33■□□□□ 0.52
USP48-204ENST00000400301 CYP11A1P05108 521 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 SLC11A1P49279 550 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 XKR6Q5GH73 641 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 KBTBD6Q86V97 674 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 NT5C3BQ969T7 300 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 ITCHQ96J02 903 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 RPL10LQ96L21 214 aaKnown RBP18.33■□□□□ 0.52
USP48-204ENST00000400301 C8orf4Q9NR00 106 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 ADPRHL2Q9NX46 363 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 NME7Q9Y5B8 376 aa18.33■□□□□ 0.52
USP48-204ENST00000400301 FAM234BA2RU67 622 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 IQCF5A8MTL0 148 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 ALPIP09923 528 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 FAM174BQ3ZCQ3 159 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 RABL3Q5HYI8 236 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 RAB41Q5JT25 222 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 RNF19BQ6ZMZ0 732 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 KBTBD2Q8IY47 623 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 ANKRD49Q8WVL7 239 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 DERL2Q9GZP9 239 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 PTGDR2Q9Y5Y4 395 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 FFAR2O15552 330 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 POLR2EP19388 210 aaKnown RBP18.32■□□□□ 0.52
USP48-204ENST00000400301 MCCD1P59942 119 aaPredicted RBP18.32■□□□□ 0.52
USP48-204ENST00000400301 ZNF483Q8TF39 744 aaPredicted RBP18.32■□□□□ 0.52
USP48-204ENST00000400301 ELOVL7A1L3X0 281 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 CD1DP15813 335 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 RPL26P61254 145 aaKnown RBP18.32■□□□□ 0.52
USP48-204ENST00000400301 UFM1P61960 85 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 ZNF423Q2M1K9 1284 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 LYSMD3Q7Z3D4 306 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 TRAPPC5Q8IUR0 188 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 SPATA17Q96L03 361 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 APOA1P02647 267 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 ATP6V1E1P36543 226 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 CDH15P55291 814 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 USP46P62068 366 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 TLR1Q15399 786 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 PIGGQ5H8A4 983 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 GPR156Q8NFN8 814 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 BBS2Q9BXC9 721 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 GPR62Q9BZJ7 368 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 ASAH2Q9NR71 780 aa18.32■□□□□ 0.52
USP48-204ENST00000400301 HAS3O00219 553 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 AGTR2P50052 363 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 BEND5Q7L4P6 421 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 SCLYQ96I15 445 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 LRRC3Q9BY71 257 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 ATG10Q9H0Y0 220 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 USE1Q9NZ43 259 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 SNX8Q9Y5X2 465 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 CLDN9O95484 217 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 GATMP50440 423 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 DGKQP52824 942 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 MS4A2Q01362 244 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 MERTKQ12866 999 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 GRB7Q14451 532 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 SETMARQ53H47 684 aaPredicted RBP18.31■□□□□ 0.52
USP48-204ENST00000400301 MRPL10Q7Z7H8 261 aaKnown RBP18.31■□□□□ 0.52
USP48-204ENST00000400301 CLDN19Q8N6F1 224 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 LEMD2Q8NC56 503 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 TMEM74Q96NL1 305 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 ATXN10Q9UBB4 475 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 LRRC37AA6NMS7 1700 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 MYOCOSA0A1B0GUC4 107 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 A0A1W2PP18 115 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 PRR23AA6NEV1 266 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 M0QZQ0 153 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 THRBP10828 461 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 ALOX15P16050 662 aaPredicted RBP18.31■□□□□ 0.52
USP48-204ENST00000400301 ACADVLP49748 655 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 C1QTNF8P60827 252 aa18.31■□□□□ 0.52
USP48-204ENST00000400301 HMGCS1Q01581 520 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms