RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 BLOC1S3Q6QNY0 202 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 DEFB128Q7Z7B8 93 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 OR52B6Q8NGF0 335 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 OR2T34Q8NGX1 318 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 OR2T3Q8NH03 318 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 RIN3Q8TB24 985 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 DNAJB14Q8TBM8 379 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 LRRC58Q96CX6 371 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SLC22A12Q96S37 553 aa18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 KLF16Q9BXK1 252 aaPredicted RBP18.15■□□□□ 0.5
CHRFAM7A-202ENST00000397827 AKAP10O43572 662 aa18.14■□□□□ 0.5
CHRFAM7A-202ENST00000397827 OR4F21O95013 312 aa18.14■□□□□ 0.5
CHRFAM7A-202ENST00000397827 MATN4O95460 622 aa18.14■□□□□ 0.5
CHRFAM7A-202ENST00000397827 STAMBPO95630 424 aa18.14■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CLPTM1O96005 669 aa18.14■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ARL1P40616 181 aaPredicted RBP18.14■□□□□ 0.5
CHRFAM7A-202ENST00000397827 MYO1HQ8N1T3 1032 aa18.14■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CDYL2Q8N8U2 506 aa18.14■□□□□ 0.5
CHRFAM7A-202ENST00000397827 HBEGFQ99075 208 aa18.14■□□□□ 0.5
CHRFAM7A-202ENST00000397827 HOPXQ9BPY8 73 aaPredicted RBP18.14■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TM6SF2Q9BZW4 377 aa18.14■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SLC52A3Q9NQ40 469 aa18.14■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ABCD2Q9UBJ2 740 aa18.14■□□□□ 0.5
CHRFAM7A-202ENST00000397827 A0A1B0GTW7 788 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 K7ERQ8 282 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 STX16O14662 325 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 KLK8O60259 260 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PSMA3P25788 255 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 HSPA13P48723 471 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 RHOAP61586 193 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 UFM1P61960 85 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 NOGQ13253 232 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 TGFBIQ15582 683 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 IFNEQ86WN2 208 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 WFDC5Q8TCV5 224 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 OVCA2Q8WZ82 227 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 RPL10LQ96L21 214 aaKnown RBP18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 RETREG1Q9H6L5 497 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 LHX3Q9UBR4 397 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 AFF4Q9UHB7 1163 aaKnown RBP18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 VPS9D1Q9Y2B5 631 aa18.14■□□□□ 0.49
CHRFAM7A-202ENST00000397827 HTR3EA5X5Y0 456 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 E2F3O00716 465 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 FAM58BPP0C7Q3 252 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 NELFEP18615 380 aaKnown RBP18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 UGT1A6P19224 532 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CASP2P42575 452 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 RABL3Q5HYI8 236 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 LYSMD3Q7Z3D4 306 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 MINDY1Q8N5J2 469 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ZNF461Q8TAF7 563 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PXYLP1Q8TE99 480 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 KCNJ9Q92806 393 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 SLAMF8Q9P0V8 285 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CNOT11Q9UKZ1 510 aaKnown RBP18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 TPST1O60507 370 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 TNFAIP8O95379 198 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 UROSP10746 265 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 MBL2P11226 248 aaPredicted RBP18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PORP16435 677 aaPredicted RBP18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PSMD7P51665 324 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 SMAD3P84022 425 aaKnown RBP18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 FUT11Q495W5 492 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PAGE3Q5JUK9 113 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 HABP4Q5JVS0 413 aaKnown RBP18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 METTL25Q8N6Q8 603 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 DUS3LQ96G46 650 aaKnown RBP18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 FEM1AQ9BSK4 669 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 GPR63Q9BZJ6 419 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 YIPF1Q9Y548 306 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 FAM149AA5PLN7 773 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ASPDHA6ND91 283 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 GIPC1O14908 333 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PFDN6O15212 129 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 MLYCDO95822 493 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PRR35P0CG20 571 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ITGB6P18564 788 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 AHI1Q8N157 1196 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ZNF597Q96LX8 424 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 EFHD1Q9BUP0 239 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 C1QTNF3Q9BXJ4 246 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 GRIP2Q9C0E4 1043 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 TIMMDC1Q9NPL8 285 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 IL17CQ9P0M4 197 aa18.13■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CHEK2O96017 543 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 PSMC3P17980 439 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CA5AP35218 305 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ZFP36L2P47974 494 aaKnown RBP18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 ZXDBP98169 803 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 NFYCQ13952 458 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 XKR7Q5GH72 579 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 OGFOD2Q6N063 350 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 TXNDC11Q6PKC3 985 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 GPRIN3Q6ZVF9 776 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 CAMK1DQ8IU85 385 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 OR56A4Q8NGH8 313 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 IGSF21Q96ID5 467 aa18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 UHRF1Q96T88 793 aaPredicted RBP18.12■□□□□ 0.49
CHRFAM7A-202ENST00000397827 SLC2A11Q9BYW1 496 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms