RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 RNFT2Q96EX2 444 aa0.43□□□□□ -2.34
MIR548A3-201ENST00000385297 OXNAD1Q96HP4 312 aaPredicted RBP0.43□□□□□ -2.34
MIR548A3-201ENST00000385297 SIN3AQ96ST3 1273 aa0.43□□□□□ -2.34
MIR548A3-201ENST00000385297 EIF2AK1Q9BQI3 630 aaKnown RBP0.43□□□□□ -2.34
MIR548A3-201ENST00000385297 DGCR6LQ9BY27 220 aa0.43□□□□□ -2.34
MIR548A3-201ENST00000385297 CHST12Q9NRB3 414 aa0.43□□□□□ -2.34
MIR548A3-201ENST00000385297 ADAM22Q9P0K1 906 aa0.43□□□□□ -2.34
MIR548A3-201ENST00000385297 FBXL17Q9UF56 701 aa0.43□□□□□ -2.34
MIR548A3-201ENST00000385297 KCND3Q9UK17 655 aa0.43□□□□□ -2.34
MIR548A3-201ENST00000385297 SLC39A10Q9ULF5 831 aa0.43□□□□□ -2.34
MIR548A3-201ENST00000385297 NOB1Q9ULX3 412 aaKnown RBP0.43□□□□□ -2.34
MIR548A3-201ENST00000385297 WDR37Q9Y2I8 494 aa0.43□□□□□ -2.34
MIR548A3-201ENST00000385297 MUC6Q6W4X9 2439 aa0.43□□□□□ -2.34
MIR548A3-201ENST00000385297 PABPN1LA6NDY0 278 aaKnown RBP0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 C15orf61A6NNL5 157 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 ERVV-1B6SEH8 477 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 SLC33A1O00400 549 aaPredicted RBP0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 KLF11O14901 512 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 BCAT2O15382 392 aaPredicted RBP0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 KCNN4O15554 427 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 IRAK2O43187 625 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 PHF1O43189 567 aaPredicted RBP0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 NCK2O43639 380 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 GALR3O60755 368 aaPredicted RBP0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 LRCH4O75427 683 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 SKAP2O75563 359 aaPredicted RBP0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 LIPFP07098 398 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 UGT1A1P22309 533 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 SHMT1P34896 483 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 PNLIPRP1P54315 467 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 RIPK4P57078 832 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 CD300CQ08708 224 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 TCTN1Q2MV58 587 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 RAB6CQ53S08 254 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 FAM209BQ5JX69 171 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 HOGA1Q86XE5 327 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 LACC1Q8IV20 430 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 FMNL3Q8IVF7 1028 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 PHC2Q8IXK0 858 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 MARVELD2Q8N4S9 558 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 ZNF383Q8NA42 475 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 AQP11Q8NBQ7 271 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 RHOXF1Q8NHV9 184 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 CHPT1Q8WUD6 406 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 RAB40AQ8WXH6 277 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 AGAP4Q96P64 663 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 PSMB7Q99436 277 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 PITPNM3Q9BZ71 974 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 RAB6CQ9H0N0 254 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 ATP13A3Q9H7F0 1226 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 HEXA-AS1Q9H8Q6 139 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 DDX21Q9NR30 783 aaKnown RBP eCLIP0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 NDE1Q9NXR1 346 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 PTTG2Q9NZH5 202 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 ZNF282Q9UDV7 671 aaPredicted RBP0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 PPP1R3CQ9UQK1 317 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 COL4A3BPQ9Y5P4 624 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 SBNO2Q9Y2G9 1366 aa0.42□□□□□ -2.34
MIR548A3-201ENST00000385297 AQP12BA6NM10 295 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 A8MXK9 166 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 ANKRD28O15084 1053 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 NBNO60934 754 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 ACTL6BO94805 426 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 C9P02748 559 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 THY1P04216 161 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 GPIP06744 558 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 EDN2P20800 178 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 UBA7P41226 1012 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 AP2B1P63010 937 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 GOLGA8FQ08AF8 430 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 SMAD1Q15797 465 aaKnown RBP0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 UTF1Q5T230 341 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 INTS8Q75QN2 995 aaKnown RBP0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 PTAR1Q7Z6K3 402 aaPredicted RBP0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 ZNF561Q8N587 486 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 NGEFQ8N5V2 710 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 GOLGA6L2Q8N9W4 650 aaPredicted RBP0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 HUS1BQ8NHY5 278 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 FAM71BQ8TC56 605 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 STYXQ8WUJ0 223 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 DNAAF4Q8WXU2 420 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 C3orf49Q96BT1 292 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 SLC41A2Q96JW4 573 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 FAM110AQ9BQ89 295 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 SLC39A8Q9C0K1 460 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 LMAN2LQ9H0V9 348 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 PABPC3Q9H361 631 aaKnown RBP0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 TUBB1Q9H4B7 451 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 SPHK2Q9NRA0 654 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 TEX10Q9NXF1 929 aaPredicted RBP0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 GRID1Q9ULK0 1009 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 DDX52Q9Y2R4 599 aaKnown RBP eCLIP0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 LSM4Q9Y4Z0 139 aaKnown RBP0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 ANGPTL3Q9Y5C1 460 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 STYXL1Q9Y6J8 313 aa0.41□□□□□ -2.34
MIR548A3-201ENST00000385297 ATP6V0E1O15342 81 aa0.4□□□□□ -2.35
MIR548A3-201ENST00000385297 MT-CYBP00156 380 aaPredicted RBP0.4□□□□□ -2.35
MIR548A3-201ENST00000385297 THEGLP0DJG4 465 aa0.4□□□□□ -2.35
MIR548A3-201ENST00000385297 ELK1P19419 428 aa0.4□□□□□ -2.35
MIR548A3-201ENST00000385297 PRKACGP22612 351 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms