RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 LMNTD2Q8IXW0 634 aa12.49□□□□□ -0.41
SMN1-202ENST00000380707 MINDY1Q8N5J2 469 aa12.49□□□□□ -0.41
SMN1-202ENST00000380707 BEND7Q8N7W2 519 aaPredicted RBP12.49□□□□□ -0.41
SMN1-202ENST00000380707 C2CD4AQ8NCU7 369 aaPredicted RBP12.49□□□□□ -0.41
SMN1-202ENST00000380707 CALML6Q8TD86 181 aa12.49□□□□□ -0.41
SMN1-202ENST00000380707 HEXDCQ8WVB3 486 aa12.49□□□□□ -0.41
SMN1-202ENST00000380707 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMN1-202ENST00000380707 LPGAT1Q92604 370 aa12.49□□□□□ -0.41
SMN1-202ENST00000380707 TCF12Q99081 682 aa12.49□□□□□ -0.41
SMN1-202ENST00000380707 FAM167BQ9BTA0 163 aa12.49□□□□□ -0.41
SMN1-202ENST00000380707 RMI1Q9H9A7 625 aa12.49□□□□□ -0.41
SMN1-202ENST00000380707 FBXO6Q9NRD1 293 aaPredicted RBP12.49□□□□□ -0.41
SMN1-202ENST00000380707 SMYD2Q9NRG4 433 aa12.49□□□□□ -0.41
SMN1-202ENST00000380707 UCKL1Q9NWZ5 548 aa12.49□□□□□ -0.41
SMN1-202ENST00000380707 APOBEC3BQ9UH17 382 aaKnown RBP12.49□□□□□ -0.41
SMN1-202ENST00000380707 FBXO5Q9UKT4 447 aa12.49□□□□□ -0.41
SMN1-202ENST00000380707 PLEKHM1Q9Y4G2 1056 aa12.49□□□□□ -0.41
SMN1-202ENST00000380707 GPSM3Q9Y4H4 160 aa12.49□□□□□ -0.41
SMN1-202ENST00000380707 CABIN1Q9Y6J0 2220 aa12.49□□□□□ -0.41
SMN1-202ENST00000380707 CXorf49A8MYA2 514 aaPredicted RBP12.48□□□□□ -0.41
SMN1-202ENST00000380707 CDX4O14627 284 aaPredicted RBP12.48□□□□□ -0.41
SMN1-202ENST00000380707 DFNA5O60443 496 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 HAUS5O94927 633 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 AHSGP02765 367 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 CELA2BP08218 269 aaPredicted RBP12.48□□□□□ -0.41
SMN1-202ENST00000380707 ZNF7P17097 686 aaPredicted RBP12.48□□□□□ -0.41
SMN1-202ENST00000380707 GABRB3P28472 473 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 BLKP51451 505 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 ATXN3P54252 364 aaPredicted RBP12.48□□□□□ -0.41
SMN1-202ENST00000380707 PMS2P54278 862 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 HNRNPKP61978 463 aaKnown RBP eCLIP12.48□□□□□ -0.41
SMN1-202ENST00000380707 C1orf61Q13536 156 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 GTF2H3Q13889 308 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 CHST15Q7LFX5 561 aaPredicted RBP12.48□□□□□ -0.41
SMN1-202ENST00000380707 LRRTM4Q86VH4 590 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 SLC25A45Q8N413 288 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 OXR1Q8N573 874 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 ZNF548Q8NEK5 533 aaPredicted RBP12.48□□□□□ -0.41
SMN1-202ENST00000380707 CCL4L1Q8NHW4 92 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 FBF1Q8TES7 1133 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 BIRC8Q96P09 236 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 OR2M4Q96R27 311 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 LRRC61Q9BV99 259 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 CLPBQ9H078 707 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 P2RY12Q9H244 342 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 INTS10Q9NVR2 710 aaKnown RBP12.48□□□□□ -0.41
SMN1-202ENST00000380707 ZFATQ9P243 1243 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 SLC23A2Q9UGH3 650 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 RAB21Q9UL25 225 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 GPR34Q9UPC5 381 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 CRYL1Q9Y2S2 319 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 PSAT1Q9Y617 370 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 FAM186AA6NE01 2351 aa12.48□□□□□ -0.41
SMN1-202ENST00000380707 UBA6A0AVT1 1052 aaPredicted RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 FAM159BA6NKW6 160 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 H3BM21 787 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 PRMT5O14744 637 aaPredicted RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 KMOO15229 486 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 GDF9O60383 454 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 GFRA3O60609 400 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 SPAG6O75602 509 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 PIAS2O75928 621 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 CTSEP14091 401 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 DGKAP23743 735 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 MCM3P25205 808 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 EPHA8P29322 1005 aaPredicted RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 FMO4P31512 558 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 LEPRP48357 1165 aaKnown RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 CTBSQ01459 385 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 PLA2G4EQ3MJ16 856 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 KBTBD12Q3ZCT8 623 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 BCL7AQ4VC05 210 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 RNF187Q5TA31 235 aaPredicted RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 ZNF449Q6P9G9 518 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 CNSTQ6PJW8 725 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 KIAA0408Q6ZU52 694 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 TRMT10CQ7L0Y3 403 aaKnown RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 NRROSQ86YC3 692 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 SAP25Q8TEE9 199 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 AENQ8WTP8 325 aaKnown RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 SCG3Q8WXD2 468 aaKnown RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 ZNF514Q96K75 400 aaPredicted RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 EDEM2Q9BV94 578 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 DNAAF2Q9NVR5 837 aaKnown RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 TRNAU1APQ9NX07 287 aaKnown RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 RABGEF1Q9UJ41 708 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 TDRD6O60522 2096 aaKnown RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 IQCF5A8MTL0 148 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 PFDN6O15212 129 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 AQP9O43315 295 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 POP7O75817 140 aaKnown RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 AP2A2O94973 939 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 ACP5P13686 325 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 RPS3P23396 243 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMN1-202ENST00000380707 AK4P27144 223 aaPredicted RBP12.47□□□□□ -0.41
SMN1-202ENST00000380707 STX2P32856 288 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 PHBP35232 272 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 ABCG1P45844 678 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 PRLHRP49683 370 aa12.47□□□□□ -0.41
SMN1-202ENST00000380707 CCT8P50990 548 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms