RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ISOC1Q96CN7 298 aa25.03■■□□□ 1.6
C9orf40-201ENST00000376854 CDK15Q96Q40 435 aa25.03■■□□□ 1.6
C9orf40-201ENST00000376854 GPR62Q9BZJ7 368 aa25.03■■□□□ 1.6
C9orf40-201ENST00000376854 HCSTQ9UBK5 93 aa25.03■■□□□ 1.6
C9orf40-201ENST00000376854 EBF1Q9UH73 591 aa25.03■■□□□ 1.6
C9orf40-201ENST00000376854 V9GYQ6 96 aa25.03■■□□□ 1.6
C9orf40-201ENST00000376854 PFDN6O15212 129 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 KDELR3O43731 214 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 LDLRP01130 860 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 ZDHHC11BP0C7U3 371 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 PSMA3P25788 255 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 CAPGP40121 348 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 TM4SF4P48230 202 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 RPS24P62847 133 aaKnown RBP25.02■■□□□ 1.6
C9orf40-201ENST00000376854 ATP6AP1LQ52LC2 224 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 ZRANB3Q5FWF4 1079 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 ABRAXAS1Q6UWZ7 409 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 CPNE9Q8IYJ1 553 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 PROKR1Q8TCW9 393 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 SEPHS2Q99611 448 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 PCDHGC4Q9Y5F7 938 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 SNAP91O60641 907 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 HRH2P25021 359 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 HTR1EP28566 365 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 RANBP1P43487 201 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 EMP3P54852 163 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 CDH4P55283 916 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 EMX2Q04743 252 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 HABP4Q5JVS0 413 aaKnown RBP25.02■■□□□ 1.6
C9orf40-201ENST00000376854 SLC2A7Q6PXP3 512 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 PROSER1Q86XN7 944 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 OR52B6Q8NGF0 335 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 ZNF382Q96SR6 550 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 BPIFA1Q9NP55 256 aa25.02■■□□□ 1.6
C9orf40-201ENST00000376854 AGO1Q9UL18 857 aaKnown RBP25.02■■□□□ 1.6
C9orf40-201ENST00000376854 H3BNC9 293 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 VNN2O95498 520 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 ENO2P09104 434 aaPredicted RBP25.01■■□□□ 1.59
C9orf40-201ENST00000376854 GATMP50440 423 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 PRKG2Q13237 762 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 CYBRD1Q53TN4 286 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 RSPO2Q6UXX9 243 aaPredicted RBP25.01■■□□□ 1.59
C9orf40-201ENST00000376854 ZFAND4Q86XD8 727 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 EFHBQ8N7U6 833 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 VPS50Q96JG6 964 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 PLEKHG4BQ96PX9 1271 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 LRRC3Q9BY71 257 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 SARS2Q9NP81 518 aaKnown RBP25.01■■□□□ 1.59
C9orf40-201ENST00000376854 GALNT8Q9NY28 637 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 RAI2Q9Y5P3 530 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 E5RI56 91 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 VARSP26640 1264 aaKnown RBP25.01■■□□□ 1.59
C9orf40-201ENST00000376854 ARL1P40616 181 aaPredicted RBP25.01■■□□□ 1.59
C9orf40-201ENST00000376854 ERVPABLB-1P60509 514 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 FAM189BP81408 668 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 DUSP4Q13115 394 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 Q6ZSR9 355 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 PATL1Q86TB9 770 aaKnown RBP25.01■■□□□ 1.59
C9orf40-201ENST00000376854 HID1Q8IV36 788 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 OSCP1Q8WVF1 389 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 NPLQ9BXD5 320 aaPredicted RBP25.01■■□□□ 1.59
C9orf40-201ENST00000376854 SEZ6LQ9BYH1 1024 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 CIDEBQ9UHD4 219 aa25.01■■□□□ 1.59
C9orf40-201ENST00000376854 THSD7BQ9C0I4 1608 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 NPPAP01160 153 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 OR4D2P58180 307 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 GPR17Q13304 367 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 TGFBIQ15582 683 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 GPR180Q86V85 440 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 CHID1Q9BWS9 393 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 DNMT3LQ9UJW3 386 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 hCG_2014768A0A024R1R8 64 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 CD9P21926 228 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 SLC11A2P49281 568 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 NUP107P57740 925 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 LETMD1Q6P1Q0 360 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 KCNJ9Q92806 393 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 C12orf43Q96C57 262 aaKnown RBP25■■□□□ 1.59
C9orf40-201ENST00000376854 RNF145Q96MT1 663 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 TMEM45AQ9NWC5 275 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 COMMD8Q9NX08 183 aa25■■□□□ 1.59
C9orf40-201ENST00000376854 A0A0J9YVX5 310 aa24.99■■□□□ 1.59
C9orf40-201ENST00000376854 ZNF701M0R085 212 aaPredicted RBP24.99■■□□□ 1.59
C9orf40-201ENST00000376854 CBX4O00257 560 aa24.99■■□□□ 1.59
C9orf40-201ENST00000376854 STX7O15400 261 aaKnown RBP24.99■■□□□ 1.59
C9orf40-201ENST00000376854 SNAP29O95721 258 aa24.99■■□□□ 1.59
C9orf40-201ENST00000376854 ADARP55265 1226 aaKnown RBP24.99■■□□□ 1.59
C9orf40-201ENST00000376854 CTBSQ01459 385 aa24.99■■□□□ 1.59
C9orf40-201ENST00000376854 FXNQ16595 210 aa24.99■■□□□ 1.59
C9orf40-201ENST00000376854 RALGPS2Q86X27 583 aaPredicted RBP24.99■■□□□ 1.59
C9orf40-201ENST00000376854 SFRP1Q8N474 314 aa24.99■■□□□ 1.59
C9orf40-201ENST00000376854 GFM2Q969S9 779 aaKnown RBP24.99■■□□□ 1.59
C9orf40-201ENST00000376854 NACA2Q9H009 215 aa24.99■■□□□ 1.59
C9orf40-201ENST00000376854 SOX17Q9H6I2 414 aaPredicted RBP24.99■■□□□ 1.59
C9orf40-201ENST00000376854 CDC14AQ9UNH5 594 aa24.99■■□□□ 1.59
C9orf40-201ENST00000376854 DYTNA2CJ06 578 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 RHOCP08134 193 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 ATP5C1P36542 298 aaKnown RBP24.98■■□□□ 1.59
C9orf40-201ENST00000376854 CLCN4P51793 760 aa24.98■■□□□ 1.59
C9orf40-201ENST00000376854 PTPRRQ15256 657 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms