RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 TFAP2DQ7Z6R9 452 aa11.13□□□□□ -0.63
SYNPO2L-201ENST00000372873 FAM83FQ8NEG4 500 aaPredicted RBP11.13□□□□□ -0.63
SYNPO2L-201ENST00000372873 SPPL2BQ8TCT7 592 aa11.13□□□□□ -0.63
SYNPO2L-201ENST00000372873 FCGR1BQ92637 280 aa11.13□□□□□ -0.63
SYNPO2L-201ENST00000372873 RPL3LQ92901 407 aaKnown RBP11.13□□□□□ -0.63
SYNPO2L-201ENST00000372873 LENG9Q96B70 501 aa11.13□□□□□ -0.63
SYNPO2L-201ENST00000372873 TTYH1Q9H313 450 aaPredicted RBP11.13□□□□□ -0.63
SYNPO2L-201ENST00000372873 NTN4Q9HB63 628 aa11.13□□□□□ -0.63
SYNPO2L-201ENST00000372873 MOCS1Q9NZB8 636 aa11.13□□□□□ -0.63
SYNPO2L-201ENST00000372873 MALT1Q9UDY8 824 aa11.13□□□□□ -0.63
SYNPO2L-201ENST00000372873 GIMAP2Q9UG22 337 aa11.13□□□□□ -0.63
SYNPO2L-201ENST00000372873 NUP50Q9UKX7 468 aa11.13□□□□□ -0.63
SYNPO2L-201ENST00000372873 NFASCO94856 1347 aa11.13□□□□□ -0.63
SYNPO2L-201ENST00000372873 A0A0G2JPF8 293 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 MEIOCA2RUB1 952 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 HNRNPCL3B7ZW38 293 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 PIP5K1BO14986 540 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 GRID2O43424 1007 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 NR3C2P08235 984 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 HNRNPCL4P0DMR1 293 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 PSMA1P25786 263 aaKnown RBP11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 DPP6P42658 865 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 SLC26A2P50443 739 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 SEMA5AQ13591 1074 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 ACOX1Q15067 660 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 ESCO2Q56NI9 601 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 TMEM199Q8N511 208 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 PTCD2Q8WV60 388 aaKnown RBP11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 ZDHHC15Q96MV8 337 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 KATNAL1Q9BW62 490 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 LRRC3Q9BY71 257 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 PPIL3Q9H2H8 161 aaKnown RBP11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 FARSBQ9NSD9 589 aaKnown RBP11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 SSR3Q9UNL2 185 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 LAMB4A4D0S4 1761 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 PRAMEF33A0A0G2JMD5 474 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 PRAMEF10O60809 474 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 SNHG28P0DPA3 235 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 ITGA1P56199 1179 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 TAS2R39P59534 338 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 OR10A6Q8NH74 314 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 ZNF516Q92618 1163 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 CELF6Q96J87 481 aaKnown RBP11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 MMP28Q9H239 520 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 GMPR2Q9P2T1 348 aaKnown RBP11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 FADS2P1A8MWK0 482 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 DNTTP04053 509 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 GJA9P57773 515 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 LRRC74AQ0VAA2 488 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 GALEQ14376 348 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 CRY1Q16526 586 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 NRARPQ7Z6K4 114 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 SYVN1Q86TM6 617 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 SLC38A4Q969I6 547 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 KIF12Q96FN5 646 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 PSKH2Q96QS6 385 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 SMAD5Q99717 465 aaKnown RBP11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 BRD7Q9NPI1 651 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 PLSCR3Q9NRY6 295 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 RGS18Q9NS28 235 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 AKT3Q9Y243 479 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 HES2Q9Y543 173 aa11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 MAGED1Q9Y5V3 778 aaPredicted RBP11.12□□□□□ -0.63
SYNPO2L-201ENST00000372873 NDUFS3O75489 264 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 PDGFAP04085 211 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 NFKB1P19838 968 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 TGM1P22735 817 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 EMX1Q04741 257 aaPredicted RBP11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 EFR3AQ14156 821 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 LAPTM4AQ15012 233 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 RUNDC3AQ59EK9 446 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 CHMP1BQ7LBR1 199 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 KRT74Q7RTS7 529 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 DENND6AQ8IWF6 608 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 DCP1BQ8IZD4 617 aaKnown RBP11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 SLC37A3Q8NCC5 494 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 RNFT2Q96EX2 444 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 GTPBP2Q9BX10 602 aaKnown RBP11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 AGO4Q9HCK5 861 aaKnown RBP11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 FAM105AQ9NUU6 356 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 CLCA3PQ9Y6N3 262 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 COL18A1P39060 1754 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 PKD1L3Q7Z443 1732 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 USP54Q70EL1 1684 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 LRP6O75581 1613 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 MYL12BO14950 172 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 PGK2P07205 417 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 HOXA10P31260 410 aaPredicted RBP11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 NDST1P52848 882 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 RBP5P82980 135 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 SLC6A3Q01959 620 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 RPL6Q02878 288 aaKnown RBP11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 CHRNEQ04844 493 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 IL18Q14116 193 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 PLA2G4EQ3MJ16 856 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 FBXO48Q5FWF7 155 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 IL27RAQ6UWB1 636 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 IDO2Q6ZQW0 420 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 OR5K1Q8NHB7 308 aa11.11□□□□□ -0.63
SYNPO2L-201ENST00000372873 WDR36Q8NI36 951 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms