RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 COMMD8Q9NX08 183 aa17.26■□□□□ 0.35
CHTOP-203ENST00000368690 DNAJB9Q9UBS3 223 aa17.26■□□□□ 0.35
CHTOP-203ENST00000368690 SRRDQ9UH36 339 aa17.26■□□□□ 0.35
CHTOP-203ENST00000368690 H3BMM5 538 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 M0QX08 132 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 M0R3G1 203 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 CLDN5O00501 218 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 MAFKO60675 156 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 GMNNO75496 209 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 S1PR4O95977 384 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 CHRNA1P02708 482 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 ANXA6P08133 673 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 LINC00032P0C843 101 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 FDXRP22570 491 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 NFKBIAP25963 317 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 CCND3P30281 292 aaPredicted RBP17.25■□□□□ 0.35
CHTOP-203ENST00000368690 HOXA11P31270 313 aaPredicted RBP17.25■□□□□ 0.35
CHTOP-203ENST00000368690 RYKP34925 604 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 GRIK1P39086 918 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 SUOXP51687 545 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 POLR2JP52435 117 aaKnown RBP17.25■□□□□ 0.35
CHTOP-203ENST00000368690 OR4D2P58180 307 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 PPP2R2BQ00005 443 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 CD47Q08722 323 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 LCP2Q13094 533 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 TIGD7Q6NT04 549 aaPredicted RBP17.25■□□□□ 0.35
CHTOP-203ENST00000368690 OSTM1Q86WC4 334 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 ARMC8Q8IUR7 673 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 OR13J1Q8NGT2 312 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 ITFG1Q8TB96 612 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 SGCDQ92629 289 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 VPS33AQ96AX1 596 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 ZNF419Q96HQ0 510 aaPredicted RBP17.25■□□□□ 0.35
CHTOP-203ENST00000368690 RPL10LQ96L21 214 aaKnown RBP17.25■□□□□ 0.35
CHTOP-203ENST00000368690 CCDC115Q96NT0 180 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 KATNAL1Q9BW62 490 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 UGT2B28Q9BY64 529 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 ATP13A1Q9HD20 1204 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 ATP11BQ9Y2G3 1177 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 COL4A4P53420 1690 aaPredicted RBP17.25■□□□□ 0.35
CHTOP-203ENST00000368690 RRN3P2A6NIE6 340 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 SLC1A7O00341 560 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 SEPT4O43236 478 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 PMPCBO75439 489 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 NDST3O95803 873 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 MTHFD2P13995 350 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 CD40LGP29965 261 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 MTHFRP42898 656 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 CHRNA4P43681 627 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 DIO3P55073 304 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 MEP1AQ16819 746 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 IMPG1Q17R60 797 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 CTU2Q2VPK5 515 aaKnown RBP17.25■□□□□ 0.35
CHTOP-203ENST00000368690 FUT11Q495W5 492 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 RAB41Q5JT25 222 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 LAIR2Q6ISS4 152 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 TMEM74Q96NL1 305 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 AMBRA1Q9C0C7 1298 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 TFB2MQ9H5Q4 396 aaKnown RBP17.25■□□□□ 0.35
CHTOP-203ENST00000368690 SUN2Q9UH99 717 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 NEU3Q9UQ49 428 aa17.25■□□□□ 0.35
CHTOP-203ENST00000368690 MIA3Q5JRA6 1907 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 DFFAO00273 331 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 GABRDO14764 452 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 AREL1O15033 823 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 XYLBO75191 536 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 INMTO95050 263 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 SERPINB1P30740 379 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 ISL1P61371 349 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 PURAQ00577 322 aaKnown RBP17.24■□□□□ 0.35
CHTOP-203ENST00000368690 XKR7Q5GH72 579 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 FAM219BQ5XKK7 198 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 SULT1C3Q6IMI6 304 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 ARHGAP36Q6ZRI8 547 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 LGI2Q8N0V4 545 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 DYNC2LI1Q8TCX1 351 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 FAR1Q8WVX9 515 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 YIPF6Q96EC8 236 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 EHD1Q9H4M9 534 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 GORASP2Q9H8Y8 452 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 SNX10Q9Y5X0 201 aa17.24■□□□□ 0.35
CHTOP-203ENST00000368690 FAM92AA1XBS5 289 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 NUAK1O60285 661 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 NADKO95544 446 aaPredicted RBP17.23■□□□□ 0.35
CHTOP-203ENST00000368690 HLA-DQB2P05538 268 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 GGT1P19440 569 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 HOXC13P31276 330 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 PPP5CP53041 499 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 DNASE1L3Q13609 305 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 PGS1Q32NB8 556 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 RFX4Q33E94 735 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 ZC3H12BQ5HYM0 836 aaKnown RBP17.23■□□□□ 0.35
CHTOP-203ENST00000368690 ZNF691Q5VV52 312 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 UGT3A1Q6NUS8 523 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 KDELC1Q6UW63 502 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 CXCL17Q6UXB2 119 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 LRRC49Q8IUZ0 686 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.23■□□□□ 0.35
CHTOP-203ENST00000368690 CHAC2Q8WUX2 184 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 TEX37Q96LM6 180 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms