RNA–Protein interactions for RNA: ENST00000368205.7

PTPRK-202, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-202ENST00000368205 NOTCH2NLQ7Z3S9 236 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 GTSCR1Q86UQ5 136 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 DSELQ8IZU8 1212 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 KRT222Q8N1A0 295 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 SVIPQ8NHG7 77 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 DUSP19Q8WTR2 217 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 LRRC59Q96AG4 307 aaKnown RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 ZNF274Q96GC6 653 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 ZNF396Q96N95 335 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 LRRC2Q9BYS8 371 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 FTOQ9C0B1 505 aaKnown RBP eCLIP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 SIL1Q9H173 461 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 MKKSQ9NPJ1 570 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 DDX4Q9NQI0 724 aaKnown RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 ZNF446Q9NWS9 450 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 TRMT1Q9NXH9 659 aaKnown RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 DBNLQ9UJU6 430 aaKnown RBP3.67□□□□□ -1.82
PTPRK-202ENST00000368205 STON1Q9Y6Q2 735 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 OVOS2A0A0G2JMS6 1433 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 NCAPD2Q15021 1401 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 SALL1Q9NSC2 1324 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 PXDNQ92626 1479 aa3.67□□□□□ -1.82
PTPRK-202ENST00000368205 PHRF1Q9P1Y6 1649 aaKnown RBP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 RFX7Q2KHR2 1363 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 ABCC6O95255 1503 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 A0A0G2JLW4 131 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 KRTAP16-1A8MUX0 517 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 PER2O15055 1255 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 KINO60870 393 aaKnown RBP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 WDR1O75083 606 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 CRLF1O75462 422 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 DDX58O95786 925 aaKnown RBP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 MMP2P08253 660 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 HMGB1P09429 215 aaKnown RBP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 ETFAP13804 333 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 DDX5P17844 614 aaKnown RBP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 RXRAP19793 462 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 DCTP40126 519 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 HNRNPH2P55795 449 aaKnown RBP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 EVCP57679 992 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 GSDMDP57764 484 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 ACTR2P61160 394 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 GNB1P62873 340 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 EEF1A1P68104 462 aaKnown RBP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 AIMP1Q12904 312 aaKnown RBP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 TIGD6Q17RP2 521 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 RABL6Q3YEC7 729 aaPredicted RBP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 EEF1A1P5Q5VTE0 462 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 ADALQ6DHV7 355 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 JMJD6Q6NYC1 403 aaPredicted RBP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 SLC27A1Q6PCB7 646 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 TRIM65Q6PJ69 517 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 CCDC73Q6ZRK6 1079 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 TICAM2Q86XR7 235 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 KIAA2013Q8IYS2 634 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 ZNF34Q8IZ26 560 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 FBXL16Q8N461 479 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 SRBD1Q8N5C6 995 aaKnown RBP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 FBXL8Q96CD0 374 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 SCRN2Q96FV2 425 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 PPP1R13BQ96KQ4 1090 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 ZNF570Q96NI8 536 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 BPIFA3Q9BQP9 254 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 SYT17Q9BSW7 474 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 XPO4Q9C0E2 1151 aaKnown RBP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 SLC32A1Q9H598 525 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 EPHX3Q9H6B9 360 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 RASSF1Q9NS23 344 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 IFNKQ9P0W0 207 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 GRHPRQ9UBQ7 328 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.66□□□□□ -1.821e-8■■■□□ 16
PTPRK-202ENST00000368205 FAF1Q9UNN5 650 aaPredicted RBP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 DLGAP4Q9Y2H0 992 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 RNF215Q9Y6U7 377 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 V9GYY5 206 aaPredicted RBP3.66□□□□□ -1.82
PTPRK-202ENST00000368205 NEDD4P46934 1319 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 SH3TC1Q8TE82 1336 aa3.66□□□□□ -1.82
PTPRK-202ENST00000368205 AFDNP55196 1824 aaKnown RBP3.65□□□□□ -1.82
PTPRK-202ENST00000368205 C5P01031 1676 aa3.65□□□□□ -1.82
PTPRK-202ENST00000368205 CAMTA1Q9Y6Y1 1673 aa3.65□□□□□ -1.82
PTPRK-202ENST00000368205 NWD2Q9ULI1 1742 aa3.65□□□□□ -1.82
PTPRK-202ENST00000368205 A0A1B0GVL5 298 aa3.65□□□□□ -1.83
PTPRK-202ENST00000368205 E7EWF7 191 aa3.65□□□□□ -1.83
PTPRK-202ENST00000368205 PRC1O43663 620 aa3.65□□□□□ -1.83
PTPRK-202ENST00000368205 MYOD1P15172 320 aa3.65□□□□□ -1.83
PTPRK-202ENST00000368205 VEGFAP15692 232 aaPredicted RBP3.65□□□□□ -1.83
PTPRK-202ENST00000368205 AGAP20933 346 aa3.65□□□□□ -1.83
PTPRK-202ENST00000368205 EIF2S3P41091 472 aaKnown RBP3.65□□□□□ -1.83
PTPRK-202ENST00000368205 NDUFA8P51970 172 aa3.65□□□□□ -1.83
PTPRK-202ENST00000368205 DHX8Q14562 1220 aaKnown RBP3.65□□□□□ -1.83
PTPRK-202ENST00000368205 C1orf141Q5JVX7 400 aa3.65□□□□□ -1.83
PTPRK-202ENST00000368205 SYT10Q6XYQ8 523 aa3.65□□□□□ -1.83
PTPRK-202ENST00000368205 SLC36A4Q6YBV0 504 aa3.65□□□□□ -1.83
PTPRK-202ENST00000368205 ASB18Q6ZVZ8 466 aa3.65□□□□□ -1.83
PTPRK-202ENST00000368205 COPS6Q7L5N1 327 aa3.65□□□□□ -1.83
PTPRK-202ENST00000368205 ATG9AQ7Z3C6 839 aa3.65□□□□□ -1.83
PTPRK-202ENST00000368205 CREBRFQ8IUR6 639 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms