RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 MAU2Q9Y6X3 613 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 LRRC14BA6NHZ5 514 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 K7EPI3 171 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 CTSHP09668 335 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 NCK1P16333 377 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 MATKP42679 507 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 TBRG1Q3YBR2 411 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 KLHL22Q53GT1 634 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 SCIMPQ6UWF3 145 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 GLB1L3Q8NCI6 653 aaPredicted RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 RFT1Q96AA3 541 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF347Q96SE7 839 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 GBA3Q9H227 469 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF696Q9H7X3 374 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 OR2AT4A6NND4 320 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 TP73O15350 636 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 CRYZL1O95825 349 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 VTNP04004 478 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 GDI2P50395 445 aaKnown RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 POLR2LP62875 67 aaKnown RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 AP5B1Q2VPB7 878 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 XKR6Q5GH73 641 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 HAGHLQ6PII5 290 aaPredicted RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 USP45Q70EL2 814 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 OR4L1Q8NH43 312 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 PHOX2BQ99453 314 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 STXBP5LQ9Y2K9 1186 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 AP2A1O95782 977 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 GJA1P17302 382 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 RAB39AQ14964 217 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 NPTX1Q15818 432 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 CRTC2Q53ET0 693 aaPredicted RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 GPAT3Q53EU6 434 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF730Q6ZMV8 503 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 DSG4Q86SJ6 1040 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 C11orf65Q8NCR3 313 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 CCDC107Q8WV48 283 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 ZDHHC15Q96MV8 337 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 PRDM12Q9H4Q4 367 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 FAIMQ9NVQ4 179 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 SLC12A8A0AV02 714 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 DENRO43583 198 aaKnown RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 OXSR1O95747 527 aaPredicted RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 IFNW1P05000 195 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 CXCR2P25025 360 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 AQP1P29972 269 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 LCN1P31025 176 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 SKP1P63208 163 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 EIF5AP63241 154 aaKnown RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 SEMA5AQ13591 1074 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF697Q5TEC3 545 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 RNF44Q7L0R7 432 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 DNAJB7Q7Z6W7 309 aaPredicted RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 ZDHHC21Q8IVQ6 265 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 MKL1Q969V6 931 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 PKP2Q99959 881 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 TCF25Q9BQ70 676 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 PCDHAC1Q9H158 963 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 HPF1Q9NWY4 346 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 HTR3EA5X5Y0 456 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 H0YGN5 161 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 CXCR6O00574 342 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 FOSL1P15407 271 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 FAPQ12884 760 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 DCAF12L1Q5VU92 463 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 TRMT11Q7Z4G4 463 aaKnown RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ANKRD13BQ86YJ7 626 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 DNERQ8NFT8 737 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF431Q8TF32 576 aaPredicted RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 KLHL5Q96PQ7 755 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 POLR3BQ9NW08 1133 aaPredicted RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 NFS1Q9Y697 457 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 SLX4Q8IY92 1834 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 NPEPPSL1A6NEC2 478 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ARPC2O15144 300 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 C7P10643 843 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 NFIXQ14938 502 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ARMC12Q5T9G4 340 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 EMC10Q5UCC4 262 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 UNC93AQ86WB7 457 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 TRUB1Q8WWH5 349 aaKnown RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 GPN3Q9UHW5 284 aaPredicted RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 DYNC1LI2O43237 492 aaPredicted RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 KLRK1P26718 216 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ADAM8P78325 824 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 RPA4Q13156 261 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ZACNQ401N2 412 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 KLHL35Q6PF15 583 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 KIF18BQ86Y91 864 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 OR52J3Q8NH60 311 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 OR10A6Q8NH74 314 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 SLC9A6Q92581 669 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 TMEM39BQ9GZU3 492 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 TAS2R9Q9NYW1 312 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 SNX4O95219 450 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 RPLP2P05387 115 aaKnown RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF24P17028 368 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 CD72P21854 359 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 TGFB2P61812 414 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 PTPRNQ16849 979 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms