RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 TMEM106CQ9BVX2 250 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 NR2E1Q9Y466 385 aa19.2■□□□□ 0.66
HDAC4-201ENST00000345617 VTNP04004 478 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 DEFB106AQ8N104 65 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 UBR7Q8N806 425 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 PIGKQ92643 395 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 CAMK1GQ96NX5 476 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 PCBD2Q9H0N5 130 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 PORCNQ9H237 461 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 PIH1D1Q9NWS0 290 aaKnown RBP19.19■□□□□ 0.66
HDAC4-201ENST00000345617 RGS17Q9UGC6 210 aaPredicted RBP19.19■□□□□ 0.66
HDAC4-201ENST00000345617 RGS8P57771 180 aaPredicted RBP19.19■□□□□ 0.66
HDAC4-201ENST00000345617 MAB21L3Q8N8X9 362 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 GALNT6Q8NCL4 622 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 DUSP9Q99956 384 aaKnown RBP19.19■□□□□ 0.66
HDAC4-201ENST00000345617 AIF1LQ9BQI0 150 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 EIF2B3Q9NR50 452 aaKnown RBP19.19■□□□□ 0.66
HDAC4-201ENST00000345617 NDOR1Q9UHB4 597 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 RARRES1P49788 294 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 SAMD14Q8IZD0 417 aaPredicted RBP19.19■□□□□ 0.66
HDAC4-201ENST00000345617 FITM2Q8N6M3 262 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 ZNF570Q96NI8 536 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 NUSAP1Q9BXS6 441 aaKnown RBP19.19■□□□□ 0.66
HDAC4-201ENST00000345617 ARL8BQ9NVJ2 186 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 PLEKHN1Q494U1 663 aaPredicted RBP19.19■□□□□ 0.66
HDAC4-201ENST00000345617 REP15Q6BDI9 236 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 LINGO2Q7L985 606 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 SPPL2CQ8IUH8 684 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 NUDT15Q9NV35 164 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 ZNF69Q9UC07 566 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 A0A1W2PQ67 120 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 OR1I1O60431 355 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 CAPN15O75808 1086 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 GLDCP23378 1020 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 FAM35AQ86V20 835 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 MIOSQ9NXC5 875 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 ARF3P61204 181 aaPredicted RBP19.19■□□□□ 0.66
HDAC4-201ENST00000345617 ARF1P84077 181 aaKnown RBP19.19■□□□□ 0.66
HDAC4-201ENST00000345617 RPL6Q02878 288 aaKnown RBP19.19■□□□□ 0.66
HDAC4-201ENST00000345617 KLF10Q13118 480 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 WSCD2Q2TBF2 565 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 GXYLT1Q4G148 440 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 ZDHHC6Q9H6R6 413 aa19.19■□□□□ 0.66
HDAC4-201ENST00000345617 CHKAP35790 457 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 PRKD1Q15139 912 aaPredicted RBP19.18■□□□□ 0.66
HDAC4-201ENST00000345617 BRMS1LQ5PSV4 323 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 OTOP1Q7RTM1 612 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 C17orf64Q86WR6 236 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 C12orf50Q8NA57 414 aaPredicted RBP19.18■□□□□ 0.66
HDAC4-201ENST00000345617 I3L521 148 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 NME6O75414 186 aaPredicted RBP19.18■□□□□ 0.66
HDAC4-201ENST00000345617 CYP3A4P08684 503 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 CAP2P40123 477 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 APLP1P51693 650 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 SMARCB1Q12824 385 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 SYVN1Q86TM6 617 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 AMIGO1Q86WK6 493 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 SLC30A2Q9BRI3 323 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 LRRC3Q9BY71 257 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 LCN1P31025 176 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 EFCAB3Q8N7B9 438 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 OR5T3Q8NGG3 340 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 STOML3Q8TAV4 291 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 IRF2BPLQ9H1B7 796 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 ABCB9Q9NP78 766 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 TBX1O43435 398 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 FAM86B2P0C5J1 330 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 GRIK4Q16099 956 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 HAGHLQ6PII5 290 aaPredicted RBP19.18■□□□□ 0.66
HDAC4-201ENST00000345617 CERS6Q6ZMG9 384 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 BLOC1S4Q9NUP1 217 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 PAPSS1O43252 624 aaPredicted RBP19.18■□□□□ 0.66
HDAC4-201ENST00000345617 LRATO95237 230 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 MYCP01106 439 aaPredicted RBP19.18■□□□□ 0.66
HDAC4-201ENST00000345617 ISLR2Q6UXK2 745 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 MECRQ9BV79 373 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 PCDHGB5Q9Y5G0 923 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 SEC23AQ15436 765 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 SLC44A3Q8N4M1 653 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 PRMT6Q96LA8 375 aaPredicted RBP19.18■□□□□ 0.66
HDAC4-201ENST00000345617 PPM1MQ96MI6 270 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 NPHS1O60500 1241 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 NR2C1P13056 603 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 LAMP2P13473 410 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 GRK5P34947 590 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 RORAP35398 523 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 SMU1Q2TAY7 513 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 TWIST2Q8WVJ9 160 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 LHX5Q9H2C1 402 aa19.18■□□□□ 0.66
HDAC4-201ENST00000345617 ZNF490Q9ULM2 529 aaPredicted RBP19.18■□□□□ 0.66
HDAC4-201ENST00000345617 H3BRB1 525 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 SLC35G4P0C7Q5 338 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 RTP1P59025 263 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 CXorf40AQ8TE69 158 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.17■□□□□ 0.662e-6■■■■■ 26.8
HDAC4-201ENST00000345617 TUT1Q9H6E5 874 aaKnown RBP19.17■□□□□ 0.66
HDAC4-201ENST00000345617 TRAV19A0A0A6YYK7 116 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 OR7A10O76100 309 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 KCNA5P22460 613 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 SLC1A2P43004 574 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms