RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 FAM95CA0A1B0GW59 222 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 KRT87PA6NCN2 255 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 ALDOAP04075 364 aaKnown RBP16.28■□□□□ 0.2
SHOX-201ENST00000334060 GP5P40197 560 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 MSH2P43246 934 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 PTPN5P54829 565 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 TAS2R39P59534 338 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 IRF9Q00978 393 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 ALG11Q2TAA5 492 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 ZDHHC20Q5W0Z9 365 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 TMEM220Q6QAJ8 160 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 KYAT3Q6YP21 454 aaKnown RBP16.28■□□□□ 0.2
SHOX-201ENST00000334060 NLRP8Q86W28 1048 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 SLC26A11Q86WA9 606 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 VRK3Q8IV63 474 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 DENND6BQ8NEG7 585 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 ARL8AQ96BM9 186 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 ELMO2Q96JJ3 720 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 CYP4F12Q9HCS2 524 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 IKZF3Q9UKT9 509 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 SLC39A10Q9ULF5 831 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 DNAJC16Q9Y2G8 782 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 TDRD6O60522 2096 aaKnown RBP16.28■□□□□ 0.2
SHOX-201ENST00000334060 TP53BP1Q12888 1972 aaPredicted RBP16.28■□□□□ 0.2
SHOX-201ENST00000334060 TMEM131Q92545 1883 aa16.28■□□□□ 0.2
SHOX-201ENST00000334060 TRIM16O95361 564 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 ATP1B2P14415 290 aaPredicted RBP16.27■□□□□ 0.2
SHOX-201ENST00000334060 MSH3P20585 1137 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 CD38P28907 300 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 TTPAP49638 278 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 LIMK2P53671 638 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 IFFO1Q0D2I5 559 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 NFATC4Q14934 902 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 KLHL38Q2WGJ6 581 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 HECTD2Q5U5R9 776 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 ADGRD1Q6QNK2 874 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 SDCCAG8Q86SQ7 713 aaPredicted RBP16.27■□□□□ 0.2
SHOX-201ENST00000334060 CDKL2Q92772 493 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 PHOX2BQ99453 314 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 NRTNQ99748 197 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 CPNE1Q99829 537 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 C19orf43Q9BQ61 176 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 CDH19Q9H159 772 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 TRIM39Q9HCM9 518 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 PILRBQ9UKJ0 227 aa16.27■□□□□ 0.2
SHOX-201ENST00000334060 TRIM49D1C9J1S8 452 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 PRMT5O14744 637 aaPredicted RBP16.27■□□□□ 0.19
SHOX-201ENST00000334060 BCAT2O15382 392 aaPredicted RBP16.27■□□□□ 0.19
SHOX-201ENST00000334060 INHBAP08476 426 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 AK4P27144 223 aaPredicted RBP16.27■□□□□ 0.19
SHOX-201ENST00000334060 CCR7P32248 378 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 GNPDA1P46926 289 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 KRT71Q3SY84 523 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 TRAPPC5Q8IUR0 188 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 CALML6Q8TD86 181 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 DTX3LQ8TDB6 740 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 ANKRD49Q8WVL7 239 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 GPR21Q99679 349 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 AARSD1Q9BTE6 412 aaKnown RBP16.27■□□□□ 0.19
SHOX-201ENST00000334060 C1QTNF1Q9BXJ1 281 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 C1QTNF7Q9BXJ2 289 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 TMEM168Q9H0V1 697 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 CENPHQ9H3R5 247 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 RHOJQ9H4E5 214 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 PHPT1Q9NRX4 125 aaPredicted RBP16.27■□□□□ 0.19
SHOX-201ENST00000334060 RAD18Q9NS91 495 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 ZNF358Q9NW07 568 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 DMTF1Q9Y222 760 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 SLC17A4Q9Y2C5 497 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 HS3ST3A1Q9Y663 406 aa16.27■□□□□ 0.19
SHOX-201ENST00000334060 PRSS38A1L453 326 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 TPP1O14773 563 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 RASGRF2O14827 1237 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 KIF1CO43896 1103 aaKnown RBP16.26■□□□□ 0.19
SHOX-201ENST00000334060 SDC3O75056 442 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 EML2O95834 649 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 PREPP48147 710 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 RACK1P63244 317 aaKnown RBP16.26■□□□□ 0.19
SHOX-201ENST00000334060 IL9RQ01113 521 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 C1orf61Q13536 156 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 ARMC3Q5W041 872 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 CHST15Q7LFX5 561 aaPredicted RBP16.26■□□□□ 0.19
SHOX-201ENST00000334060 ZC3H10Q96K80 434 aaKnown RBP16.26■□□□□ 0.19
SHOX-201ENST00000334060 IL21RQ9HBE5 538 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 ZNHIT2Q9UHR6 403 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 KCNK6Q9Y257 313 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 PCDHGA2Q9Y5H1 932 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 SNX11Q9Y5W9 270 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 PI4KAP42356 2102 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 SPTY2D1-AS1A0A0U1RR47 76 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 NUAK1O60285 661 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 ACP5P13686 325 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 PKMP14618 531 aaKnown RBP16.26■□□□□ 0.19
SHOX-201ENST00000334060 PDHA2P29803 388 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 NSG1P42857 185 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 DLG1Q12959 904 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 NFE2L1Q14494 772 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 KIF19Q2TAC6 998 aa16.26■□□□□ 0.19
SHOX-201ENST00000334060 ZNF658BQ4V348 819 aaPredicted RBP16.26■□□□□ 0.19
SHOX-201ENST00000334060 SPDYCQ5MJ68 293 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms