RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 LRP10Q7Z4F1 713 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 LIX1Q8N485 282 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 SIDT2Q8NBJ9 832 aaKnown RBP13.81□□□□□ -0.2
PRKCB-201ENST00000303531 ZNF248Q8NDW4 579 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 DTLQ9NZJ0 730 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 ITGB1BP2Q9UKP3 347 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 WWP2O00308 870 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 TRMUO75648 421 aaKnown RBP13.81□□□□□ -0.2
PRKCB-201ENST00000303531 ANGPTL1O95841 491 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 DAOAP59103 153 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 IL18R1Q13478 541 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 SF1Q15637 639 aaKnown RBP13.81□□□□□ -0.2
PRKCB-201ENST00000303531 AKIRIN2Q53H80 203 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 LEMD2Q8NC56 503 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 HTRA1Q92743 480 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 ROPN1LQ96C74 230 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 EIF2B3Q9NR50 452 aaKnown RBP13.81□□□□□ -0.2
PRKCB-201ENST00000303531 EIF2B4Q9UI10 523 aaKnown RBP13.81□□□□□ -0.2
PRKCB-201ENST00000303531 FBXW11Q9UKB1 542 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 CNTN6Q9UQ52 1028 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 TBC1D3DA0A087WVF3 549 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 TBC1D3IA0A087WXS9 549 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 TBC1D3EA0A087X179 549 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 TBC1D3KA0A087X1G2 549 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 FAM92AA1XBS5 289 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 MYBPHLA2RUH7 354 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 TBC1D3FA6NER0 549 aaPredicted RBP13.81□□□□□ -0.2
PRKCB-201ENST00000303531 TBC1D3LB9A6J9 549 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 GNRH1P01148 92 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 TBC1D3HP0C7X1 549 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 IGFBP4P22692 258 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 LDLRAP1Q5SW96 308 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 TBC1D3GQ6DHY5 549 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 TBC1D3CQ6IPX1 549 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 ZDHHC24Q6UX98 284 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 CPNE8Q86YQ8 564 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 TBC1D3Q8IZP1 549 aaPredicted RBP13.81□□□□□ -0.2
PRKCB-201ENST00000303531 PSMG2Q969U7 264 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 TIMMDC1Q9NPL8 285 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 XPNPEP1Q9NQW7 623 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 CCDC162PA2VCL2 907 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 NDST2P52849 883 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 NPY5RQ15761 445 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 AKAP14Q86UN6 197 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 BEND7Q8N7W2 519 aaPredicted RBP13.81□□□□□ -0.2
PRKCB-201ENST00000303531 CLEC4CQ8WTT0 213 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 MCIDASD6RGH6 385 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 H3BNX3 289 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 NPHS1O60500 1241 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 VNN1O95497 513 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 DNTTP04053 509 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 NAT14Q8WUY8 206 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 UPF1Q92900 1129 aaKnown RBP eCLIP13.81□□□□□ -0.21e-9■■■□□ 16.9
PRKCB-201ENST00000303531 SQORQ9Y6N5 450 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 TOP3BO95985 862 aaKnown RBP13.81□□□□□ -0.2
PRKCB-201ENST00000303531 ZBTB6Q15916 424 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 SNAPC1Q16533 368 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 SLC10A6Q3KNW5 377 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 PIK3R6Q5UE93 754 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 ANKRD46Q86W74 232 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 PHYKPLQ8IUZ5 450 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 HM13Q8TCT9 377 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 GULP1Q9UBP9 304 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 WASF2Q9Y6W5 498 aa13.81□□□□□ -0.2
PRKCB-201ENST00000303531 UGT1A9O60656 530 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 AQP4P55087 323 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 AHSA2Q719I0 299 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 FCRL4Q96PJ5 515 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 HIPK3Q9H422 1215 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 UGT1A7Q9HAW7 530 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 UGT1A10Q9HAW8 530 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 UGT1A8Q9HAW9 530 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 MBD2Q9UBB5 411 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 CAMTA1Q9Y6Y1 1673 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 IGKV6D-41A0A0C4DH26 115 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 FAM86C2PA6NEL3 165 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 BTBD19C9JJ37 291 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 TMEM63AO94886 807 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 C9P02748 559 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 FOXN2P32314 431 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 SERPINA9Q86WD7 417 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 GPR65Q8IYL9 337 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 MAGEH1Q9H213 219 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 GTF2IRD1Q9UHL9 959 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 PHF11Q9UIL8 331 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 FCF1Q9Y324 198 aaKnown RBP13.8□□□□□ -0.2
PRKCB-201ENST00000303531 A0A1B0GVM2 712 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 TCAF2A6NFQ2 919 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 ENPEPQ07075 957 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 EBPLQ9BY08 206 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 GPC6Q9Y625 555 aaPredicted RBP13.8□□□□□ -0.2
PRKCB-201ENST00000303531 DNAJA2O60884 412 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 SLC43A3Q8NBI5 491 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 EXOSC8Q96B26 276 aaKnown RBP13.8□□□□□ -0.2
PRKCB-201ENST00000303531 FKBPLQ9UIM3 349 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 PLIN4Q96Q06 1357 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 PLK4O00444 970 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 TULP3O75386 442 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 ELNP15502 786 aa13.8□□□□□ -0.2
PRKCB-201ENST00000303531 SLC1A2P43004 574 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms