RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 E5RI56 91 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 FDXRP22570 491 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 S100A1P23297 94 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 HTR7P34969 479 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 RGRP47804 291 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 NEK2P51955 445 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 LINGO4Q6UY18 593 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 KLHDC8BQ8IXV7 354 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 FNDC5Q8NAU1 212 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 BRSK1Q8TDC3 778 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 BIRC8Q96P09 236 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 KCTD14Q9BQ13 255 aaPredicted RBP13.32□□□□□ -0.28
CTDP1-202ENST00000299543 CINPQ9BW66 212 aaPredicted RBP13.32□□□□□ -0.28
CTDP1-202ENST00000299543 PRM3Q9NNZ6 103 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 PLK2Q9NYY3 685 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 PCDHB8Q9UN66 801 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 F5H5T6 163 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 PAPSS2O95340 614 aaPredicted RBP13.32□□□□□ -0.28
CTDP1-202ENST00000299543 PMS2P3Q13401 168 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 ABI1Q8IZP0 508 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 DEPDC4Q8N2C3 294 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.32□□□□□ -0.28
CTDP1-202ENST00000299543 FBXL20Q96IG2 436 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 SLC30A3Q99726 388 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 AARSD1Q9BTE6 412 aaKnown RBP13.32□□□□□ -0.28
CTDP1-202ENST00000299543 SMOXQ9NWM0 555 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 ZNF229Q9UJW7 825 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 DGKBQ9Y6T7 804 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 KPNA6O60684 536 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 CHEK2O96017 543 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 FGF1P05230 155 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 MYCLP1P12525 358 aaPredicted RBP13.31□□□□□ -0.28
CTDP1-202ENST00000299543 SLC6A2P23975 617 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 IL10RBQ08334 325 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 TWF1Q12792 350 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 ZNF829Q3KNS6 432 aaPredicted RBP13.31□□□□□ -0.28
CTDP1-202ENST00000299543 MFSD14CQ5VZR4 134 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 NIPAL1Q6NVV3 410 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 USP43Q70EL4 1123 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 IGFN1Q86VF2 1251 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 TRIB2Q92519 343 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 L3HYPDHQ96EM0 354 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 RNF145Q96MT1 663 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 ZBED2Q9BTP6 218 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 TLR8Q9NR97 1041 aaKnown RBP13.31□□□□□ -0.28
CTDP1-202ENST00000299543 PNPLA3Q9NST1 481 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 GIN1Q9NXP7 522 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 EIF2B4Q9UI10 523 aaKnown RBP13.31□□□□□ -0.28
CTDP1-202ENST00000299543 TOR1BO14657 336 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 EI24O14681 340 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 ARPC2O15144 300 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 SYNCRIPO60506 623 aaKnown RBP13.31□□□□□ -0.28
CTDP1-202ENST00000299543 OR4F21O95013 312 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 GUCA1CO95843 209 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 HOXC8P31273 242 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 PIK3CGP48736 1102 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 STC1P52823 247 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 PAGE3Q5JUK9 113 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 ARTNQ5T4W7 220 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 CMTR2Q8IYT2 770 aaKnown RBP13.31□□□□□ -0.28
CTDP1-202ENST00000299543 PPM1MQ96MI6 270 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 TRIM15Q9C019 465 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 SYTL2Q9HCH5 934 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 ATP13A1Q9HD20 1204 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 KLQ9UEF7 1012 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 Q9Y3F1 56 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 MYLKQ15746 1914 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 LOC285095A0A1B0GVY8 99 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 CCDC154A6NI56 674 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 H3BNH8 94 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 CLOCKO15516 846 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 SULT1C4O75897 302 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 TYMPP19971 482 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 HLA-DPA1P20036 260 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 TACR2P21452 398 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 CTGFP29279 349 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 FLT3LGP49771 235 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 GATMP50440 423 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 TIAL1Q01085 375 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTDP1-202ENST00000299543 LIPEQ05469 1076 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 LCP2Q13094 533 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 BEND5Q7L4P6 421 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 ERMP1Q7Z2K6 904 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 CAMK1DQ8IU85 385 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 DENND1CQ8IV53 801 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 PSD4Q8NDX1 1056 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 ROPN1LQ96C74 230 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 ATOH8Q96SQ7 321 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 POLR1BQ9H9Y6 1135 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 CLK4Q9HAZ1 481 aaKnown RBP13.31□□□□□ -0.28
CTDP1-202ENST00000299543 FKBPLQ9UIM3 349 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 ZMYM5Q9UJ78 669 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 N6AMT1Q9Y5N5 214 aa13.31□□□□□ -0.28
CTDP1-202ENST00000299543 NOTOA8MTQ0 251 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 A8MX80 341 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 CYBBP04839 570 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 ELNP15502 786 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 GGT5P36269 586 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 ACADVLP49748 655 aa13.3□□□□□ -0.28
CTDP1-202ENST00000299543 MGAT3Q09327 533 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms