RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 BTBD9Q96Q07 612 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 PSKH2Q96QS6 385 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 SH3BP1Q9Y3L3 701 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 IGLV3-10A0A075B6K4 115 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 HLA-DPA1P20036 260 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 CALRP27797 417 aaKnown RBP13.38□□□□□ -0.27
TTC39B-201ENST00000297615 CDH4P55283 916 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 SATB1Q01826 763 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 FAM45BPQ6NSW5 357 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 HMBOX1Q6NT76 420 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 KIAA0408Q6ZU52 694 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 LARP4Q71RC2 724 aaKnown RBP eCLIP13.38□□□□□ -0.27
TTC39B-201ENST00000297615 SERPINA9Q86WD7 417 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 ADCY4Q8NFM4 1077 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 TSPAN14Q8NG11 270 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 FAM45AQ8TCE6 357 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 VPS50Q96JG6 964 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 ZFYVE19Q96K21 471 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 PLEKHG4BQ96PX9 1271 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 ATG10Q9H0Y0 220 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 POLG2Q9UHN1 485 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 CRLS1Q9UJA2 301 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 A0A1B0GVM2 712 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 PARNO95453 639 aaKnown RBP13.38□□□□□ -0.27
TTC39B-201ENST00000297615 PKMP14618 531 aaKnown RBP13.38□□□□□ -0.27
TTC39B-201ENST00000297615 CSRP3P50461 194 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 RHDQ02161 417 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 MAP7Q14244 749 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 CHRNA6Q15825 494 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 TMEM259Q4ZIN3 620 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 CHSY3Q70JA7 882 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 ANKRD46Q86W74 232 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 ZSWIM9Q86XI8 627 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 TMEM25Q86YD3 366 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 PCYOX1LQ8NBM8 494 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 MAELQ96JY0 434 aaKnown RBP13.38□□□□□ -0.27
TTC39B-201ENST00000297615 PDFQ9HBH1 243 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 MAP10Q9P2G4 905 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 ZNF225Q9UK10 706 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 RNF11Q9Y3C5 154 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 ANGPTL3Q9Y5C1 460 aa13.38□□□□□ -0.27
TTC39B-201ENST00000297615 BRWD1Q9NSI6 2320 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 OR2AG2A6NM03 316 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 HNRNPRO43390 633 aaKnown RBP13.37□□□□□ -0.27
TTC39B-201ENST00000297615 SYNCRIPO60506 623 aaKnown RBP13.37□□□□□ -0.27
TTC39B-201ENST00000297615 CLDN11O75508 207 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 CAPN1P07384 714 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 HSPA8P11142 646 aaKnown RBP13.37□□□□□ -0.27
TTC39B-201ENST00000297615 ZNF26P17031 533 aaPredicted RBP13.37□□□□□ -0.27
TTC39B-201ENST00000297615 MAGEA11P43364 429 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 YBEYP58557 167 aaPredicted RBP13.37□□□□□ -0.27
TTC39B-201ENST00000297615 DNAJB13P59910 316 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 PHKG1Q16816 387 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 CTSL3PQ5NE16 218 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 SAMD4BQ5PRF9 694 aaKnown RBP13.37□□□□□ -0.27
TTC39B-201ENST00000297615 Q6ZVU0 165 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 TMEM150AQ86TG1 271 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 PTCD2Q8WV60 388 aaKnown RBP13.37□□□□□ -0.27
TTC39B-201ENST00000297615 FUBP1Q96AE4 644 aaKnown RBP13.37□□□□□ -0.27
TTC39B-201ENST00000297615 VPS13AQ96RL7 3174 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 PIKFYVEQ9Y2I7 2098 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 KANSL1LA0AUZ9 987 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 HIDE1A8MVS5 230 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 VILLO15195 856 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 PABPC4LP0CB38 370 aaKnown RBP13.37□□□□□ -0.27
TTC39B-201ENST00000297615 MTPNP58546 118 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 NR6A1Q15406 480 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 AP5B1Q2VPB7 878 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 DGKKQ5KSL6 1271 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 ANKS6Q68DC2 871 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 SLC2A7Q6PXP3 512 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 MARVELD2Q8N4S9 558 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 CHST14Q8NCH0 376 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 OR2T11Q8NH01 316 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 MAGEE2Q8TD90 523 aaPredicted RBP13.37□□□□□ -0.27
TTC39B-201ENST00000297615 FBXL20Q96IG2 436 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 FEM1CQ96JP0 617 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 BIRC8Q96P09 236 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 EFHD1Q9BUP0 239 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 MAGEH1Q9H213 219 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 CWH43Q9H720 699 aa13.37□□□□□ -0.27
TTC39B-201ENST00000297615 INTS7Q9NVH2 962 aaKnown RBP13.37□□□□□ -0.27
TTC39B-201ENST00000297615 KDELR3O43731 214 aa13.36□□□□□ -0.27
TTC39B-201ENST00000297615 VPS26AO75436 327 aa13.36□□□□□ -0.27
TTC39B-201ENST00000297615 CXCL14O95715 111 aa13.36□□□□□ -0.27
TTC39B-201ENST00000297615 IL2P60568 153 aa13.36□□□□□ -0.27
TTC39B-201ENST00000297615 PTGR1Q14914 329 aa13.36□□□□□ -0.27
TTC39B-201ENST00000297615 PAGE3Q5JUK9 113 aa13.36□□□□□ -0.27
TTC39B-201ENST00000297615 TEX26Q8N6G2 289 aa13.36□□□□□ -0.27
TTC39B-201ENST00000297615 C12orf76Q8N812 135 aaPredicted RBP13.36□□□□□ -0.27
TTC39B-201ENST00000297615 AURKBQ96GD4 344 aaPredicted RBP13.36□□□□□ -0.27
TTC39B-201ENST00000297615 FAR2Q96K12 515 aa13.36□□□□□ -0.27
TTC39B-201ENST00000297615 BBS2Q9BXC9 721 aa13.36□□□□□ -0.27
TTC39B-201ENST00000297615 ARNT2Q9HBZ2 717 aa13.36□□□□□ -0.27
TTC39B-201ENST00000297615 KLQ9UEF7 1012 aa13.36□□□□□ -0.27
TTC39B-201ENST00000297615 OAZ3Q9UMX2 235 aa13.36□□□□□ -0.27
TTC39B-201ENST00000297615 MAGED1Q9Y5V3 778 aaPredicted RBP13.36□□□□□ -0.27
TTC39B-201ENST00000297615 C1QCP02747 245 aa13.36□□□□□ -0.27
TTC39B-201ENST00000297615 GPX3P22352 226 aa13.36□□□□□ -0.27
TTC39B-201ENST00000297615 FDXRP22570 491 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms