RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 EIF2B4Q9UI10 523 aaKnown RBP16.06■□□□□ 0.16
SREBF1-201ENST00000261646 CDV3Q9UKY7 258 aaKnown RBP16.06■□□□□ 0.16
SREBF1-201ENST00000261646 EMCNQ9ULC0 261 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 FAM240BA0A1B0GVZ2 78 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 ILVBLA1L0T0 632 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 C9IYK1 514 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 ZW10O43264 779 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 OXSR1O95747 527 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-201ENST00000261646 GNPDA1P46926 289 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 GJA9P57773 515 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 TXNL4AP83876 142 aaKnown RBP16.06■□□□□ 0.16
SREBF1-201ENST00000261646 MBTD1Q05BQ5 628 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 BOP1Q14137 746 aaKnown RBP16.06■□□□□ 0.16
SREBF1-201ENST00000261646 TAF1CQ15572 869 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-201ENST00000261646 ZSWIM7Q19AV6 140 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 KLHL12Q53G59 568 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 GPR153Q6NV75 609 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 SLC2A7Q6PXP3 512 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 ADAMTSL2Q86TH1 951 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 SLC34A3Q8N130 599 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 ITPKCQ96DU7 683 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 ZNF778Q96MU6 729 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 KCNA7Q96RP8 456 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 ADAM30Q9UKF2 790 aa16.06■□□□□ 0.16
SREBF1-201ENST00000261646 PRRC2BQ5JSZ5 2229 aaKnown RBP16.06■□□□□ 0.16
SREBF1-201ENST00000261646 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-201ENST00000261646 PLOD3O60568 738 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 SCELO95171 688 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 CCNCP24863 283 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 ITGA1P56199 1179 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 NIPAL4Q0D2K0 466 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 NOMO2Q5JPE7 1267 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 CYS1Q717R9 158 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 HDDC2Q7Z4H3 204 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 ADCK2Q7Z695 626 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 ANKFN1Q8N957 763 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 ADAMTS10Q9H324 1103 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 SESN1Q9Y6P5 492 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 A0A1W2PP18 115 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 TCAF2A6NFQ2 919 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 BTN3A3O00478 584 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 HAT1O14929 419 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 HCRTO43612 131 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 TTPAP49638 278 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 UFM1P61960 85 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 KCNAB2Q13303 367 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 GRM2Q14416 872 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 LBX2Q6XYB7 198 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 TMPRSS11AQ6ZMR5 421 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 CMTR2Q8IYT2 770 aaKnown RBP16.05■□□□□ 0.16
SREBF1-201ENST00000261646 LGI2Q8N0V4 545 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 OR4K2Q8NGD2 314 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 SLC35F5Q8WV83 523 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 ZNF597Q96LX8 424 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 SERHL2Q9H4I8 314 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 SERHLQ9NQF3 203 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 TLR8Q9NR97 1041 aaKnown RBP16.05■□□□□ 0.16
SREBF1-201ENST00000261646 ING3Q9NXR8 418 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 ZNF232Q9UNY5 417 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 CNTNAP1P78357 1384 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 SMIM28A0A1B0GU29 152 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 LOC100130705A0A1B0GUX0 176 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 GRID2O43424 1007 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 ARIH2O95376 493 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 CYP11A1P05108 521 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 MXD1Q05195 221 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 COX10Q12887 443 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 KRT33BQ14525 404 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 PIM3Q86V86 326 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 ABHD11Q8NFV4 315 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 OR5K1Q8NHB7 308 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 GRIN3AQ8TCU5 1115 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 ITCHQ96J02 903 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 UBA2Q9UBT2 640 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-201ENST00000261646 VPS28Q9UK41 221 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 GSTK1Q9Y2Q3 226 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 G3V2L1 256 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 SEMA3DO95025 777 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 SPIBQ01892 262 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 C6orf141Q5SZD1 244 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 TPRG1LQ5T0D9 272 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 PIWIL3Q7Z3Z3 882 aaKnown RBP16.05■□□□□ 0.16
SREBF1-201ENST00000261646 LRRC49Q8IUZ0 686 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 OR52J3Q8NH60 311 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 WDR36Q8NI36 951 aaKnown RBP16.05■□□□□ 0.16
SREBF1-201ENST00000261646 MZB1Q8WU39 189 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 CGREF1Q99674 301 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 MOSPD1Q9UJG1 213 aa16.05■□□□□ 0.16
SREBF1-201ENST00000261646 CHD4Q14839 1912 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 KRBA1A5PL33 1030 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 NBNO60934 754 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 PURAQ00577 322 aaKnown RBP16.04■□□□□ 0.16
SREBF1-201ENST00000261646 LAPTM4AQ15012 233 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 AFTPHQ6ULP2 937 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 C11orf96Q7Z7L8 435 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 PHF10Q8WUB8 498 aaKnown RBP16.04■□□□□ 0.16
SREBF1-201ENST00000261646 FUNDC2Q9BWH2 189 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 ZYG11BQ9C0D3 744 aa16.04■□□□□ 0.16
SREBF1-201ENST00000261646 TRIM45Q9H8W5 580 aaPredicted RBP16.04■□□□□ 0.16
SREBF1-201ENST00000261646 IPPKQ9H8X2 491 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms