RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TMEM179BQ7Z7N9 219 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 PACS2Q86VP3 889 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 KCTD6Q8NC69 237 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 HOXB13Q92826 284 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 C10orf90Q96M02 699 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 KLHL32Q96NJ5 620 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 TMEM106CQ9BVX2 250 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 EPS8L2Q9H6S3 715 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 BRD9Q9H8M2 597 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 MRPL47Q9HD33 250 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 RBM22Q9NW64 420 aaKnown RBP eCLIP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 MTRF1LQ9UGC7 380 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 HCFC1P51610 2035 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 EEF2KO00418 725 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 CDX4O14627 284 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 CTSVO60911 334 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 KRT16P08779 473 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 OR1E1P30953 314 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 CTNNB1P35222 781 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 BPIFB4P59827 614 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 BNIP1Q12981 228 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 CAPRIN2Q6IMN6 1127 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 C22orf39Q6P5X5 142 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 TMC7Q7Z402 723 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 SYVN1Q86TM6 617 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 RBM15BQ8NDT2 890 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 KCTD4Q8WVF5 259 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 ZNF75CPQ92670 426 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 RHBDF1Q96CC6 855 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 TRIM11Q96F44 468 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 RAB3IPQ96QF0 476 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 UHRF1Q96T88 793 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 HBEGFQ99075 208 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 SEZ6LQ9BYH1 1024 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 BTBD1Q9H0C5 482 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 DNMT3LQ9UJW3 386 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 DNAJC13O75165 2243 aa5.54□□□□□ -1.52
TOPBP1-201ENST00000260810 VPS13DQ5THJ4 4388 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 C1orf226A1L170 272 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 TRIM64A6NGJ6 449 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 CBFA2T3O75081 653 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 DDX5P17844 614 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 PSMB5P28074 263 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 IMPA1P29218 277 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 MAN2A2P49641 1150 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 ARPP19P56211 112 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 SATB1Q01826 763 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 DNAJC3Q13217 504 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 CHRNA6Q15825 494 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 HNRNPA1L2Q32P51 320 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 PAGE3Q5JUK9 113 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 HECTD3Q5T447 861 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 LGSNQ5TDP6 509 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 C8orf74Q6P047 294 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 ZNF449Q6P9G9 518 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 ARMCX6Q7L4S7 300 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 CHSY1Q86X52 802 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 TMPRSS6Q8IU80 811 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 FIBCD1Q8N539 461 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 FZD3Q9NPG1 666 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 COMMD10Q9Y6G5 202 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 HUWE1Q7Z6Z7 4374 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 ACOX3O15254 700 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 EFSO43281 561 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 ZNF8P17098 575 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 CSF2RBP32927 897 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 ALDH7A1P49419 539 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 GPR143P51810 404 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 DIO3P55073 304 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 FXYD6P3P58550 94 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 NFKB2Q00653 900 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 DMTNQ08495 405 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 IFFO1Q0D2I5 559 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 LRP8Q14114 963 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 STK40Q8N2I9 435 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 EFCAB3Q8N7B9 438 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 OR4K1Q8NGD4 311 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 ASB11Q8WXH4 323 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 FAM149B1Q96BN6 582 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 ARSGQ96EG1 525 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 TSPAN17Q96FV3 270 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 SRPK1Q96SB4 655 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 TRIM62Q9BVG3 475 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 C1QTNF2Q9BXJ5 285 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 WDR55Q9H6Y2 383 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 FGFR1OP2Q9NVK5 253 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 TAS2R1Q9NYW7 299 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 DSEQ9UL01 958 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 HRKO00198 91 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 LSM1O15116 133 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 VAPBO95292 243 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 NPPBP16860 134 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 CRHR1P34998 444 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 SSR1P43307 286 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 UBE3AQ05086 875 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 ZNF385CQ66K41 422 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 PIWIL4Q7Z3Z4 852 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 TAX1BP1Q86VP1 789 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 OR2I1PQ8NGU4 316 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 DYDC1Q8WWB3 177 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms