RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 FOXP4Q8IVH2 680 aaPredicted RBP4.85□□□□□ -1.63
TRA2B-201ENST00000259043 ADSSL1Q8N142 457 aa4.85□□□□□ -1.63
TRA2B-201ENST00000259043 RUFY2Q8WXA3 655 aa4.85□□□□□ -1.63
TRA2B-201ENST00000259043 SYNCQ9H7C4 482 aa4.85□□□□□ -1.63
TRA2B-201ENST00000259043 HAUS2Q9NVX0 235 aa4.85□□□□□ -1.63
TRA2B-201ENST00000259043 ICAM5Q9UMF0 924 aa4.85□□□□□ -1.63
TRA2B-201ENST00000259043 PCDHAC2Q9Y5I4 1007 aa4.85□□□□□ -1.63
TRA2B-201ENST00000259043 A3GALT2U3KPV4 340 aa4.85□□□□□ -1.63
TRA2B-201ENST00000259043 ARAP2Q8WZ64 1704 aa4.85□□□□□ -1.63
TRA2B-201ENST00000259043 MUC3AQ02505 3323 aa4.85□□□□□ -1.63
TRA2B-201ENST00000259043 TMCC2O75069 709 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 ATP2C2O75185 946 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 EIF2S2P20042 333 aaKnown RBP4.84□□□□□ -1.63
TRA2B-201ENST00000259043 EDN2P20800 178 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 AIMP1Q12904 312 aaKnown RBP4.84□□□□□ -1.63
TRA2B-201ENST00000259043 TDGQ13569 410 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 TBCEQ15813 527 aaPredicted RBP4.84□□□□□ -1.63
TRA2B-201ENST00000259043 ZNF280DQ6N043 979 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 C16orf54Q6UWD8 224 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 ZNF771Q7L3S4 317 aaPredicted RBP4.84□□□□□ -1.63
TRA2B-201ENST00000259043 SHFQ7M4L6 423 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 FAM160B2Q86V87 743 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 PARP16Q8N5Y8 322 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 PLD5Q8N7P1 536 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 GJC3Q8NFK1 279 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 METTL6Q8TCB7 284 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 ERGIC1Q969X5 290 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 BICD1Q96G01 975 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 WBP1Q96G27 269 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 PLEKHF1Q96S99 279 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 SLC25A18Q9H1K4 315 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 RETREG1Q9H6L5 497 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 MPP6Q9NZW5 540 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 VPS28Q9UK41 221 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 NFE2L3Q9Y4A8 694 aa4.84□□□□□ -1.63
TRA2B-201ENST00000259043 A0A1B0GUL6 1792 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 BDP1A6H8Y1 2624 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 TYW5A2RUC4 315 aaKnown RBP4.83□□□□□ -1.64
TRA2B-201ENST00000259043 MAGEA13PA6NCF6 341 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 TULP2O00295 520 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 AP3D1O14617 1153 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 DOK2O60496 412 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 KRT36O76013 467 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 GAGE7O76087 117 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 IGKV3-20P01619 116 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 GAGE12FP0CL80 117 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 GAGE12GP0CL81 117 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 GAGE12IP0CL82 117 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 COX7A2P14406 83 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 ABCD1P33897 745 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 BSGP35613 385 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 RAD52P43351 418 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 EIF3BP55884 814 aaKnown RBP4.83□□□□□ -1.64
TRA2B-201ENST00000259043 YWHAZP63104 245 aaKnown RBP4.83□□□□□ -1.64
TRA2B-201ENST00000259043 POU3F1Q03052 451 aaPredicted RBP4.83□□□□□ -1.64
TRA2B-201ENST00000259043 GAGE1Q13065 139 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 GAGE4Q13068 117 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 CUL4AQ13619 759 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 EFNB3Q15768 340 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 KRT24Q2M2I5 525 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 HSP90AB3PQ58FF7 597 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 CFAP58Q5T655 872 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 SNX30Q5VWJ9 437 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 PXKQ7Z7A4 578 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 TBC1D26Q86UD7 250 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 OR8H2Q8N162 312 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 MUC20Q8N307 709 aaPredicted RBP4.83□□□□□ -1.64
TRA2B-201ENST00000259043 IL17FQ96PD4 163 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 DEFB129Q9H1M3 183 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 RANBP17Q9H2T7 1088 aaKnown RBP4.83□□□□□ -1.64
TRA2B-201ENST00000259043 GHITMQ9H3K2 345 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 MTMR10Q9NXD2 777 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 SLC9A2Q9UBY0 812 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 SARDHQ9UL12 918 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 PAM16Q9Y3D7 125 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 LYVE1Q9Y5Y7 322 aa4.83□□□□□ -1.64
TRA2B-201ENST00000259043 MED23Q9ULK4 1368 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 NCOR1O75376 2440 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 KDM3AQ9Y4C1 1321 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 ZNF500O60304 480 aaPredicted RBP4.82□□□□□ -1.64
TRA2B-201ENST00000259043 TSPAN9O75954 239 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 SEC14L2O76054 403 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 PMS2P2O95744 297 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 SPARCP09486 303 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 LAMP2P13473 410 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 HARS2P49590 506 aaKnown RBP4.82□□□□□ -1.64
TRA2B-201ENST00000259043 EFNA5P52803 228 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 RPS3AP61247 264 aaKnown RBP4.82□□□□□ -1.64
TRA2B-201ENST00000259043 UFM1P61960 85 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 RPL7AP62424 266 aaKnown RBP4.82□□□□□ -1.64
TRA2B-201ENST00000259043 NEXNQ0ZGT2 675 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 DCTN2Q13561 401 aaKnown RBP4.82□□□□□ -1.64
TRA2B-201ENST00000259043 ARHGEF6Q15052 776 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 RILPL1Q5EBL4 403 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 CES5AQ6NT32 575 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 ZNF329Q86UD4 541 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 NOXA1Q86UR1 476 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 APOBEC3FQ8IUX4 373 aaKnown RBP4.82□□□□□ -1.64
TRA2B-201ENST00000259043 CERS5Q8N5B7 392 aa4.82□□□□□ -1.64
TRA2B-201ENST00000259043 DEFB123Q8N688 67 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms