RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 TIMP2P16035 220 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 AKT2P31751 481 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 SERPINB8P50452 374 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 PDE1BQ01064 536 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 INSCQ1MX18 579 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 ESRP1Q6NXG1 681 aaKnown RBP17.24■□□□□ 0.35
HOXC6-201ENST00000243108 Q6ZSR6 202 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 BBS5Q8N3I7 341 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 NSMCE3Q96MG7 304 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 PSKH2Q96QS6 385 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 SEMA3CQ99985 751 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 UCKL1Q9NWZ5 548 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 SEPT3Q9UH03 358 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 PKD1L2Q7Z442 2459 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 YKT6O15498 198 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 TSPAN6O43657 245 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 MAGEC1O60732 1142 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 EPOP01588 193 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 PAMP19021 973 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 HADHAP40939 763 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 DBN1Q16643 649 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 CCDC157Q569K6 752 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 ZNF542PQ5EBM4 170 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 CCDC121Q6ZUS5 278 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 OTOAQ7RTW8 1153 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 TMPRSS7Q7RTY8 843 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 KDELC2Q7Z4H8 507 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 TTC7BQ86TV6 843 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 OXR1Q8N573 874 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 SLC25A41Q8N5S1 370 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 OTUD6BQ8N6M0 293 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 RAB7BQ96AH8 199 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 CNDP2Q96KP4 475 aaKnown RBP17.24■□□□□ 0.35
HOXC6-201ENST00000243108 SNX15Q9NRS6 342 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 SIRPGQ9P1W8 387 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 DCDC2Q9UHG0 476 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 HS3ST3A1Q9Y663 406 aa17.24■□□□□ 0.35
HOXC6-201ENST00000243108 KNTC1P50748 2209 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 BIRC5O15392 142 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 GIMD1P0DJR0 217 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 CSRP3P50461 194 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 CLDN6P56747 220 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 LACTB2Q53H82 288 aaPredicted RBP17.23■□□□□ 0.35
HOXC6-201ENST00000243108 SIRPB2Q5JXA9 342 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 DHRS13Q6UX07 377 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 ZSWIM9Q86XI8 627 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 TRIM42Q8IWZ5 723 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 CCDC63Q8NA47 563 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 ARMC2Q8NEN0 867 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 RAB3IL1Q8TBN0 382 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 VPS39Q96JC1 886 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 GPR22Q99680 433 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 CPEB1Q9BZB8 566 aaKnown RBP17.23■□□□□ 0.35
HOXC6-201ENST00000243108 RHOJQ9H4E5 214 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 DKK3Q9UBP4 350 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 SLC2A6Q9UGQ3 507 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 EMCNQ9ULC0 261 aa17.23■□□□□ 0.35
HOXC6-201ENST00000243108 TTC24A2A3L6 582 aaPredicted RBP17.22■□□□□ 0.35
HOXC6-201ENST00000243108 CCDC78A2IDD5 438 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 FAM149AA5PLN7 773 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 MROH6A6NGR9 719 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 TAF4O00268 1085 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 TRIM38O00635 465 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 VAPBO95292 243 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 LDOC1O95751 146 aaPredicted RBP17.22■□□□□ 0.35
HOXC6-201ENST00000243108 HLA-DPA1P20036 260 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 BGNP21810 368 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 DGKAP23743 735 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 TYK2P29597 1187 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 SF3A3Q12874 501 aaKnown RBP eCLIP17.22■□□□□ 0.35
HOXC6-201ENST00000243108 FZD2Q14332 565 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 CNGA3Q16281 694 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 UGP2Q16851 508 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 INAVAQ3KP66 663 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 TSTD2Q5T7W7 516 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 RNF187Q5TA31 235 aaPredicted RBP17.22■□□□□ 0.35
HOXC6-201ENST00000243108 TRPM8Q7Z2W7 1104 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 PTAR1Q7Z6K3 402 aaPredicted RBP17.22■□□□□ 0.35
HOXC6-201ENST00000243108 ZC3HC1Q86WB0 502 aaKnown RBP17.22■□□□□ 0.35
HOXC6-201ENST00000243108 LENG8Q96PV6 779 aaPredicted RBP17.22■□□□□ 0.35
HOXC6-201ENST00000243108 KLF15Q9UIH9 416 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 MTO1Q9Y2Z2 717 aaKnown RBP17.22■□□□□ 0.35
HOXC6-201ENST00000243108 ITPR1Q14643 2758 aa17.22■□□□□ 0.35
HOXC6-201ENST00000243108 ANKRD65E5RJM6 399 aa17.21■□□□□ 0.35
HOXC6-201ENST00000243108 GOLGA8TH3BQL2 631 aa17.21■□□□□ 0.35
HOXC6-201ENST00000243108 NEMP1O14524 444 aa17.21■□□□□ 0.35
HOXC6-201ENST00000243108 MMP20O60882 483 aa17.21■□□□□ 0.35
HOXC6-201ENST00000243108 MPOP05164 745 aa17.21■□□□□ 0.35
HOXC6-201ENST00000243108 FGF1P05230 155 aa17.21■□□□□ 0.35
HOXC6-201ENST00000243108 BPGMP07738 259 aa17.21■□□□□ 0.35
HOXC6-201ENST00000243108 GSTA1P08263 222 aa17.21■□□□□ 0.35
HOXC6-201ENST00000243108 CR2P20023 1033 aa17.21■□□□□ 0.35
HOXC6-201ENST00000243108 ACADVLP49748 655 aa17.21■□□□□ 0.35
HOXC6-201ENST00000243108 CDK18Q07002 472 aa17.21■□□□□ 0.35
HOXC6-201ENST00000243108 SEPT6Q14141 434 aa17.21■□□□□ 0.35
HOXC6-201ENST00000243108 NLRP9Q7RTR0 991 aa17.21■□□□□ 0.35
HOXC6-201ENST00000243108 TRIB3Q96RU7 358 aa17.21■□□□□ 0.35
HOXC6-201ENST00000243108 FAM167BQ9BTA0 163 aa17.21■□□□□ 0.35
HOXC6-201ENST00000243108 CINPQ9BW66 212 aaPredicted RBP17.21■□□□□ 0.35
HOXC6-201ENST00000243108 KLHL14Q9P2G3 628 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms