RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 OR2AG2A6NM03 316 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 H3BMM5 538 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 LRATO95237 230 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 PCNAP12004 261 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 SF3B4Q15427 424 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 RETSATQ6NUM9 610 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 IL27RAQ6UWB1 636 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 LYSMD3Q7Z3D4 306 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 SLC15A4Q8N697 577 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 C12orf76Q8N812 135 aaPredicted RBP12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 PXYLP1Q8TE99 480 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 VPS33AQ96AX1 596 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 TSPAN18Q96SJ8 248 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 HCFC1R1Q9NWW0 138 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 ITM2BQ9Y287 266 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 CARD8Q9Y2G2 431 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 TRAF6Q9Y4K3 522 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 UPK3BL1B0FP48 263 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 UPK3BL2E5RIL1 263 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 INPPL1O15357 1258 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 INSIG1O15503 277 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 ATE1O95260 518 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 SLC2A4P14672 509 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 GSSP48637 474 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 BMXP51813 675 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 CDKN2DP55273 166 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 SMUG1Q53HV7 270 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 OGFRL1Q5TC84 451 aaPredicted RBP12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 PIWIL4Q7Z3Z4 852 aaKnown RBP12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 ADGRG6Q86SQ4 1221 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 CCDC126Q96EE4 140 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 SIRPGQ9P1W8 387 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 KLQ9UEF7 1012 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 EIF2B4Q9UI10 523 aaKnown RBP12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 EIF3FO00303 357 aaPredicted RBP12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 CLOCKO15516 846 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 DENRO43583 198 aaKnown RBP12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 SYNCRIPO60506 623 aaKnown RBP12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 H2AFYO75367 372 aaKnown RBP12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 C8AP07357 584 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 PABPC1P11940 636 aaKnown RBP12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 PPP1R8Q12972 351 aaKnown RBP12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 NAB1Q13506 487 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 KCNJ8Q15842 424 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 ANKS6Q68DC2 871 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 TMEM135Q86UB9 458 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 GPSM1Q86YR5 675 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 ZC3H7AQ8IWR0 971 aaKnown RBP12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 MZB1Q8WU39 189 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 BCL7CQ8WUZ0 217 aaPredicted RBP12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 NRBF2Q96F24 287 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 MED8Q96G25 268 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 CDKN2AIPNLQ96HQ2 116 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 SPO11Q9Y5K1 396 aa12.8□□□□□ -0.36
PCDHB4-201ENST00000194152 TRIOBPQ9H2D6 2365 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 MYO1GB0I1T2 1018 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 SYN3O14994 580 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 IDO1P14902 403 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 ATF6P18850 670 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 LPOP22079 712 aaPredicted RBP12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 CPOXP36551 454 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 SCNN1AP37088 669 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 C18orf21Q32NC0 220 aaPredicted RBP12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 TIGD2Q4W5G0 525 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 PM20D1Q6GTS8 502 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 NANOGP8Q6NSW7 305 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 C11orf96Q7Z7L8 435 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 DHFR2Q86XF0 187 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 ZCCHC7Q8N3Z6 543 aaKnown RBP12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 MRPL57Q9BQC6 102 aaKnown RBP12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 ACAT2Q9BWD1 397 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 ATG10Q9H0Y0 220 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 ZNF696Q9H7X3 374 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 GALPQ9UBC7 116 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 VTI1BQ9UEU0 232 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 NDUFAF1Q9Y375 327 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 PCDHGA3Q9Y5H0 932 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 SYNDIG1LA6NDD5 238 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 M0QZQ0 153 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 IPO13O94829 963 aaKnown RBP12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 NDST3O95803 873 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 KRT8P05787 483 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 HSPA7P48741 367 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 CYP51A1Q16850 503 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 ATG14Q6ZNE5 492 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 MRPL10Q7Z7H8 261 aaKnown RBP12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 SLAIN1Q8ND83 568 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 SNX19Q92543 992 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 RTP4Q96DX8 246 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 SPG21Q9NZD8 308 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 HTTP42858 3142 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 CLDN7O95471 211 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 AOC1P19801 751 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 CCNA2P20248 432 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 AIF1P55008 147 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 ZIK1Q3SY52 487 aaPredicted RBP12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 RSBN1Q5VWQ0 802 aaPredicted RBP12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 FIBCD1Q8N539 461 aa12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 ZNF419Q96HQ0 510 aaPredicted RBP12.79□□□□□ -0.36
PCDHB4-201ENST00000194152 ACTR8Q9H981 624 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms