RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Krt88Q9CPR6 171 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Synj2Q9D2G5 1434 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 SgceO70258 437 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Dppa5bP85965 119 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Sec24dQ6NXL1 1032 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Mtmr12Q80TA6 747 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Orai2Q8BH10 250 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Afg3l2Q8JZQ2 802 aaKnown RBP15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 TrhdeQ8K093 1025 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Pcdha1Q91Y21 948 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Bco2Q99NF1 532 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Tmem39aQ9CYC3 486 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm10271F6WY25 52 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Hsd17b10O08756 261 aaKnown RBP15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Kcnj5P48545 419 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Slc2a9Q3T9X0 538 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Sh3rf1Q69ZI1 892 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Olfr859Q7TRF5 309 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Sra1Q80VJ2 232 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Trmt2aQ8BNV1 574 aaKnown RBP15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm42417Q8K1D0 126 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gstm4Q8R5I6 218 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Ankra2Q99PE2 312 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 IcmtQ9EQK7 283 aa15.58■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Rnf169E9Q7F2 694 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Clcn7O70496 803 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Rab21P35282 222 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Ankdd1bQ14DN9 521 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 R3hdm4Q4VBF2 262 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Tmem221Q8K071 230 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gulp1Q8K2A1 304 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Acsl6Q91WC3 697 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Clec4aQ9QZ15 238 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Cyp2d34L7N463 504 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Rtkn2Q14B46 604 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Stx16Q8BVI5 326 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Dennd1cQ8CFK6 786 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Mta1Q8K4B0 715 aaKnown RBP15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Pex16Q91XC9 336 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 GzmgP13366 248 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Slfnl1Q8BHW9 410 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Pcdhga9Q91XX9 932 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Sntg1Q925E1 517 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Knl1Q66JQ7 1612 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm6356L7N2A7 188 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Psmd4O35226 376 aaKnown RBP15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Ppp3r1Q63810 170 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Sez6lQ6P1D5 963 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Slc9a4Q8BUE1 797 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Parp12Q8BZ20 711 aaKnown RBP15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Wnt8bQ9WUD6 350 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Magea6O89010 325 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Aldh2P47738 519 aaKnown RBP15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 BcheQ03311 603 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Wfikkn2Q7TQN3 571 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Depdc1aQ8CIG0 804 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Cavin3Q91VJ2 260 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Lsm12Q9D0R8 195 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Ighv11-1A0A075B5R6 117 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Rasgef1aA0A0N4SVR5 498 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm8229K7N749 213 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 HunkO88866 714 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 M6prP24668 278 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Mgat3Q10470 538 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Pdp1Q3UV70 538 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 ParpbpQ6IRT3 573 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Commd7Q8BG94 200 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 LiasQ99M04 373 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gimap3Q99MI6 301 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Rnf17Q99MV7 1640 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Acvr2bP27040 536 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Ctps1P70698 591 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Sec23aQ01405 765 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Trappc9Q3U0M1 1148 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gpr156Q6PCP7 798 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Kiaa0319lQ8K135 1048 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Nudt8Q9CR24 210 aa15.57■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Hoxa10P31310 416 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Polr2mQ6P6I6 366 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Q80VP5 184 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 LnpepQ8C129 1025 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gng13Q9JMF3 67 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Iigp1Q9QZ85 413 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm7929A0A286YDV3 213 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm21977F6U3N7 213 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm8247F6VRJ8 213 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm8005F6YKY3 213 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm3015F6ZAP6 213 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm8212F6ZMY5 213 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm7954F7BAX1 213 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm8138F7BY56 213 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm8232F7CFJ3 213 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm17079F7D8Y4 213 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Zfp708F8VPP0 541 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm8094K7N6U8 211 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm8165L7N218 213 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm8122L7N2C7 213 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Gm17078M0QW51 211 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Grb7Q03160 535 aa15.56■□□□□ 0.08
Ubr3-201ENSMUST00000055758 Dsg4Q7TMD7 1041 aa15.56■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms