RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Gtf3c2Q8BL74 907 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Fgd2Q8BY35 655 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Vps26bQ8C0E2 336 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 TdrpQ8C5P7 182 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 TrhdeQ8K093 1025 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Gspt1Q8R050 636 aaKnown RBP9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Acsf2Q8VCW8 615 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Olfr474Q8VFC9 310 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Pcdhgb1Q91XX8 918 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Pcdha6Q91Y14 946 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Rprd1bQ9CSU0 326 aaKnown RBP9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Rhox9Q9EQM5 227 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Htr3bQ9JHJ5 437 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Carm1Q9WVG6 608 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Gm6509A0A0J9YUV1 481 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Tex28B1AYN9 409 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Zfp938E9Q9G3 579 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Gm6351K9J7D1 481 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Gria2P23819 883 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Serpina3cP29621 417 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 AdprhP54923 362 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Aqp4P55088 323 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Rabl6Q5U3K5 725 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 VclQ64727 1066 aaKnown RBP9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Nomo1Q6GQT9 1214 aaKnown RBP9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 PdgfrlQ6PE55 375 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Olfr1046Q7TR79 316 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Olfr20Q7TRX9 314 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Zfp62Q8C827 914 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Zfp940Q8R2Q3 566 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Nudt4Q8R2U6 179 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Vps4aQ8VEJ9 437 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Wrnip1Q91XU0 660 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Pcdha2Q91Y17 948 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Nmnat1Q9EPA7 285 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Smad9Q9JIW5 430 aa9.85□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Gm8180E9PXN0 145 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Gp6P0C191 313 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Adamts19P59509 1210 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Sec31bQ3TZ89 1158 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Lcn3Q62471 182 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 PtprjQ64455 1238 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Sdr16c5Q7TQA3 309 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Olfr293Q7TS10 336 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Kansl2Q8BQR4 486 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Lmo3Q8BZL8 145 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 CenpxQ8C4X1 78 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Hectd2Q8CDU6 774 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Dennd1cQ8CFK6 786 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Taf10Q8K0H5 218 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Tnfaip8l1Q8K288 186 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Tmcc3Q8R310 477 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Mrgpra2Q91WW4 305 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Pcdhgc3Q91XX1 934 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Chmp1b1Q99LU0 199 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 PaicsQ9DCL9 425 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 St6galnac1Q9QZ39 526 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Psmd13Q9WVJ2 376 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 CpqQ9WVJ3 470 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Slc4a11A2AJN7 862 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Olfr596F8VQ26 312 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 H2-Q1O19441 368 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 BgnP28653 369 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Smpdl3aP70158 445 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Gpr149Q3UVY1 732 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Gm5800Q497L3 186 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Mylk4Q5SUV5 386 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Cyp2r1Q6VVW9 501 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Lrrc75bQ7TPD7 306 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Lrrc27Q80YS5 523 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Tspan9Q8BJU2 239 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Q8BL95 290 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Phtf2Q8CB19 747 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Cers2Q924Z4 380 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 TpbpbQ9CQC0 121 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Q9CQF4 240 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Dtwd1Q9D8U7 304 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Olfr703Q9EPF5 319 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 A0A1Y7VIU7 259 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Gp5O08742 567 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Hps1O08983 704 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 MndaP0DOV1 425 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Rars2Q3U186 578 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Awat2Q6E1M8 333 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Smad3Q8BUN5 425 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 CtbsQ8R242 366 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Olfr356Q8VFP5 315 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Lpin1Q91ZP3 924 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Lysmd3Q99LE3 305 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Cmc1Q9CPZ8 106 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Spock2Q9ER58 423 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Serpini2Q9JK88 405 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Asb4Q9WV71 426 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Myh7bA2AQP0 1941 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Hcn3O88705 779 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Cd3gP11942 182 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 ADGRF3Q58Y75 991 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Cyth4Q80YW0 393 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 FicdQ8BIX9 458 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Slc46a2Q8CA03 479 aa9.84□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms