RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 CCDC74AQ96AQ1 378 aa26.32■■□□□ 1.8
VEGFA-231ENST00000640499 TMEM121BQ9BXQ6 578 aaPredicted RBP26.32■■□□□ 1.8
VEGFA-231ENST00000640499 CHRAC1Q9NRG0 131 aa26.32■■□□□ 1.8
VEGFA-231ENST00000640499 RIMKLBQ9ULI2 386 aa26.32■■□□□ 1.8
VEGFA-231ENST00000640499 NEUROG3Q9Y4Z2 214 aa26.32■■□□□ 1.8
VEGFA-231ENST00000640499 RNF215Q9Y6U7 377 aa26.32■■□□□ 1.8
VEGFA-231ENST00000640499 CEP295Q9C0D2 2601 aa26.32■■□□□ 1.8
VEGFA-231ENST00000640499 KMOO15229 486 aa26.31■■□□□ 1.8
VEGFA-231ENST00000640499 AVILO75366 819 aa26.31■■□□□ 1.8
VEGFA-231ENST00000640499 ZNF7P17097 686 aaPredicted RBP26.31■■□□□ 1.8
VEGFA-231ENST00000640499 CLCNKAP51800 687 aa26.31■■□□□ 1.8
VEGFA-231ENST00000640499 E2F1Q01094 437 aa26.31■■□□□ 1.8
VEGFA-231ENST00000640499 SKIDA1Q1XH10 827 aa26.31■■□□□ 1.8
VEGFA-231ENST00000640499 HES3Q5TGS1 186 aa26.31■■□□□ 1.8
VEGFA-231ENST00000640499 XKR5Q6UX68 686 aa26.31■■□□□ 1.8
VEGFA-231ENST00000640499 CCNI2Q6ZMN8 369 aaPredicted RBP26.31■■□□□ 1.8
VEGFA-231ENST00000640499 ARL14Q8N4G2 192 aa26.31■■□□□ 1.8
VEGFA-231ENST00000640499 KLC4Q9NSK0 619 aa26.31■■□□□ 1.8
VEGFA-231ENST00000640499 MSRB2Q9Y3D2 182 aa26.31■■□□□ 1.8
VEGFA-231ENST00000640499 ITGALP20701 1170 aa26.3■■□□□ 1.8
VEGFA-231ENST00000640499 MGAT1P26572 445 aa26.3■■□□□ 1.8
VEGFA-231ENST00000640499 NPY2RP49146 381 aa26.3■■□□□ 1.8
VEGFA-231ENST00000640499 PCID2Q5JVF3 399 aa26.3■■□□□ 1.8
VEGFA-231ENST00000640499 TMEM220Q6QAJ8 160 aa26.3■■□□□ 1.8
VEGFA-231ENST00000640499 TMPRSS12Q86WS5 348 aa26.3■■□□□ 1.8
VEGFA-231ENST00000640499 NAT8LQ8N9F0 302 aa26.3■■□□□ 1.8
VEGFA-231ENST00000640499 GRK7Q8WTQ7 553 aa26.3■■□□□ 1.8
VEGFA-231ENST00000640499 HDAC10Q969S8 669 aa26.3■■□□□ 1.8
VEGFA-231ENST00000640499 SGF29Q96ES7 293 aa26.3■■□□□ 1.8
VEGFA-231ENST00000640499 CCDC3Q9BQI4 270 aa26.3■■□□□ 1.8
VEGFA-231ENST00000640499 TIMM29Q9BSF4 260 aa26.3■■□□□ 1.8
VEGFA-231ENST00000640499 EVA1BQ9NVM1 165 aa26.3■■□□□ 1.8
VEGFA-231ENST00000640499 KNTC1P50748 2209 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 IGLV3-16A0A075B6K0 115 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 TRBV23OR9-2A0A075B6M9 112 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 OR2AG2A6NM03 316 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 GAS8O95995 478 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 GLB1P16278 677 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 IVDP26440 423 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 CASQ1P31415 396 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 FOXN2P32314 431 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 GPR33Q49SQ1 333 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 ZRANB3Q5FWF4 1079 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 DET1Q7L5Y6 550 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 SERPINA9Q86WD7 417 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 KLHL7Q8IXQ5 586 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 AGGF1Q8N302 714 aaeCLIP26.29■■□□□ 1.8
VEGFA-231ENST00000640499 MAPK15Q8TD08 544 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 NAT6Q93015 286 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 PRDM8Q9NQV8 689 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 TREX1Q9NSU2 369 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 SYBUQ9NX95 663 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 SCHIP1Q9P0W5 487 aaPredicted RBP26.29■■□□□ 1.8
VEGFA-231ENST00000640499 RNF14Q9UBS8 474 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 CRLS1Q9UJA2 301 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 SLC30A1Q9Y6M5 507 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 FRYQ5TBA9 3013 aa26.29■■□□□ 1.8
VEGFA-231ENST00000640499 PPM1DO15297 605 aa26.28■■□□□ 1.8
VEGFA-231ENST00000640499 POP7O75817 140 aaKnown RBP26.28■■□□□ 1.8
VEGFA-231ENST00000640499 CACNG1Q06432 222 aa26.28■■□□□ 1.8
VEGFA-231ENST00000640499 CAMK2BQ13554 666 aa26.28■■□□□ 1.8
VEGFA-231ENST00000640499 PTK6Q13882 451 aa26.28■■□□□ 1.8
VEGFA-231ENST00000640499 IYDQ6PHW0 289 aa26.28■■□□□ 1.8
VEGFA-231ENST00000640499 ZNF438Q7Z4V0 828 aa26.28■■□□□ 1.8
VEGFA-231ENST00000640499 TRAPPC5Q8IUR0 188 aa26.28■■□□□ 1.8
VEGFA-231ENST00000640499 MPP5Q8N3R9 675 aa26.28■■□□□ 1.8
VEGFA-231ENST00000640499 GALNT15Q8N3T1 639 aa26.28■■□□□ 1.8
VEGFA-231ENST00000640499 SFRP1Q8N474 314 aa26.28■■□□□ 1.8
VEGFA-231ENST00000640499 BEND7Q8N7W2 519 aaPredicted RBP26.28■■□□□ 1.8
VEGFA-231ENST00000640499 MCUQ8NE86 351 aa26.28■■□□□ 1.8
VEGFA-231ENST00000640499 ULK4Q96C45 1275 aa26.28■■□□□ 1.8
VEGFA-231ENST00000640499 LRIT1Q9P2V4 623 aa26.28■■□□□ 1.8
VEGFA-231ENST00000640499 DNAJC16Q9Y2G8 782 aa26.28■■□□□ 1.8
VEGFA-231ENST00000640499 A0A1W2PQM1 296 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 NUDT21O43809 227 aaKnown RBP26.27■■□□□ 1.8
VEGFA-231ENST00000640499 MT-CO3P00414 261 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 MSH3P20585 1137 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 ACRV1P26436 265 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 NMBRP28336 390 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 AKT1P31749 480 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 LAMB3Q13751 1172 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 GTF2H3Q13889 308 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 PPP1R7Q15435 360 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 DBN1Q16643 649 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 FNBP1LQ5T0N5 605 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 RNASEH2BQ5TBB1 312 aaKnown RBP26.27■■□□□ 1.8
VEGFA-231ENST00000640499 FAM83HQ6ZRV2 1179 aaPredicted RBP26.27■■□□□ 1.8
VEGFA-231ENST00000640499 NLRP9Q7RTR0 991 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 DCBLD1Q8N8Z6 715 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 PPHLN1Q8NEY8 458 aaKnown RBP26.27■■□□□ 1.8
VEGFA-231ENST00000640499 GATA6Q92908 595 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 TTC25Q96NG3 672 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 KIFC1Q9BW19 673 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 ZCCHC2Q9C0B9 1178 aaKnown RBP26.27■■□□□ 1.8
VEGFA-231ENST00000640499 IL22Q9GZX6 179 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 ZDHHC3Q9NYG2 299 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 BFARQ9NZS9 450 aa26.27■■□□□ 1.8
VEGFA-231ENST00000640499 NTN3O00634 580 aaPredicted RBP26.26■■□□□ 1.79
VEGFA-231ENST00000640499 B4GAT1O43505 415 aa26.26■■□□□ 1.79
VEGFA-231ENST00000640499 SNX2O60749 519 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms