RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 GPR37L1O60883 481 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 CBSLP0DN79 551 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 CBSP35520 551 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 CAPGP40121 348 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 MATKP42679 507 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ALG10Q5BKT4 473 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ANO7Q6IWH7 933 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 METTL16Q86W50 562 aaKnown RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SLC30A8Q8IWU4 369 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ZBTB2Q8N680 514 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 DDHD1Q8NEL9 900 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ACTL9Q8TC94 416 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 IRGQQ8WZA9 623 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 OTUB2Q96DC9 234 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 IL1RAPQ9NPH3 570 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 PLK2Q9NYY3 685 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SRRDQ9UH36 339 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 CNTRLQ7Z7A1 2325 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 URB1O60287 2271 aaKnown RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 RBM47A0AV96 593 aaKnown RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 DYTNA2CJ06 578 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SUV39H1O43463 412 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SMNDC1O75940 238 aaKnown RBP eCLIP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 TRBC1P01850 177 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 PSMB4P28070 264 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ZNF143P52747 638 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 TOP3AQ13472 1001 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SDHAF4Q5VUM1 108 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 NOXRED1Q6NXP6 359 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 GCNT7Q6ZNI0 430 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 FAM183BPQ6ZVS7 135 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SLC41A1Q8IVJ1 513 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SH2D3CQ8N5H7 860 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 EPYCQ99645 322 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SLC25A23Q9BV35 468 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SP140LQ9H930 580 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 EPB41L4AQ9HCS5 686 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 APOC4-APOC2K7ER74 178 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 AOC2O75106 756 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 FARS2O95363 451 aaKnown RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 APOC2P02655 101 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SMPD1P17405 629 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ERCC2P18074 760 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 MIPP30301 263 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 LRPAP1P30533 357 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SLC12A3P55017 1021 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 CYP4F2P78329 520 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 VLDLRP98155 873 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 MLC1Q15049 377 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 VARS2Q5ST30 1063 aaKnown RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SLC25A25Q6KCM7 469 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 C6orf120Q7Z4R8 191 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ZC3HC1Q86WB0 502 aaKnown RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ARL8BQ9NVJ2 186 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 MIOSQ9NXC5 875 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 TOR4AQ9NXH8 423 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 PHTF1Q9UMS5 762 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ERCC6L2Q5T890 1561 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ILVBLA1L0T0 632 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 CCT8L1PA6NM43 557 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 TTC34A8MYJ7 566 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 RAD51CO43502 376 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ASNA1O43681 348 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 TULP3O75386 442 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 C8GP07360 202 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 CD63P08962 238 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 HBQ1P09105 142 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 IL12RB1P42701 662 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 RPS9P46781 194 aaKnown RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 PLK1P53350 603 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 PTENP60484 403 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 TRAP1Q12931 704 aaKnown RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ENPP2Q13822 863 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ESCO2Q56NI9 601 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 LRIF1Q5T3J3 769 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 DGLUCYQ7Z3D6 616 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SATL1Q86VE3 508 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 VSIG10LQ86VR7 867 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ATAD1Q8NBU5 361 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 KCTD13Q8WZ19 329 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 COPS5Q92905 334 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 TATDN2Q93075 761 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 RFKQ969G6 155 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 PTPRHQ9HD43 1115 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 CREBZFQ9NS37 354 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 HES2Q9Y543 173 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 PCDHGA3Q9Y5H0 932 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SETD1AO15047 1707 aaKnown RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 HSD17B7P56937 341 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SEC23AQ15436 765 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 GFOD2Q3B7J2 385 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 SLC8B1Q6J4K2 584 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 HFE2Q6ZVN8 426 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 GPR180Q86V85 440 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 C2orf73Q8N5S3 287 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-217ENST00000637988 TMEM68Q96MH6 324 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 CCM2Q9BSQ5 444 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 RNPEPQ9H4A4 650 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 RAB9BQ9NP90 201 aa6.08□□□□□ -1.44
SCN1A-217ENST00000637988 ABCB8Q9NUT2 735 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms