RNA–Protein interactions for RNA: ENST00000637467.1

MECP2-221, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-221ENST00000637467 CEPT1Q9Y6K0 416 aa0.66□□□□□ -2.3
MECP2-221ENST00000637467 SMCHD1A6NHR9 2005 aa0.65□□□□□ -2.3
MECP2-221ENST00000637467 ASTN2O75129 1339 aaPredicted RBP0.65□□□□□ -2.3
MECP2-221ENST00000637467 ABCA7Q8IZY2 2146 aa0.65□□□□□ -2.3
MECP2-221ENST00000637467 PRAG1Q86YV5 1406 aa0.65□□□□□ -2.3
MECP2-221ENST00000637467 IGHV4-61A0A0C4DH41 118 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 VWA3AA6NCI4 1184 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 USP17L23D6RBM5 183 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 FAM90A26D6RGX4 464 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 IPO5O00410 1097 aaKnown RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 KLF11O14901 512 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 SLC22A2O15244 555 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 KLK10O43240 276 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 BMP10O95393 424 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 FTCDO95954 541 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 IGHV3-13P01766 116 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 IGHV4-59P01825 116 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 MYL1P05976 194 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 LIPFP07098 398 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 CNPP09543 421 aaKnown RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 CAPN2P17655 700 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 APOBEC1P41238 236 aaKnown RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 PAPOLAP51003 745 aaKnown RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 NEK3P51956 506 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 CTSCP53634 463 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 LIMK2P53671 638 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 CLDN20P56880 219 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 GSDMDP57764 484 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 TRA2BP62995 288 aaKnown RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 EFNB1P98172 346 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 CDR2Q01850 454 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 COX10Q12887 443 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 LRMPQ12912 555 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 EIF4EBP2Q13542 120 aaPredicted RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 HNRNPDQ14103 355 aaKnown RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 DRAP1Q14919 205 aaPredicted RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 NECTIN1Q15223 517 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 RNPS1Q15287 305 aaKnown RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 HLA-BQ31612 363 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 C15orf32Q32M92 178 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 CCDC38Q502W7 563 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 WDR45BQ5MNZ6 344 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 NDUFAF5Q5TEU4 345 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 RSBN1Q5VWQ0 802 aaPredicted RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 NAA35Q5VZE5 725 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 OLFML2AQ68BL7 652 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 TXNDC8Q6A555 127 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 ZNF280DQ6N043 979 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 TMEM81Q6P7N7 255 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 PAPD4Q6PIY7 484 aaKnown RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 Q6ZSR9 355 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 GPRIN3Q6ZVF9 776 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 GSTA5Q7RTV2 222 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 KCNMB4Q86W47 210 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 NRROSQ86YC3 692 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 TDRPQ86YL5 185 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 MYLK4Q86YV6 388 aaPredicted RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 TICAM1Q8IUC6 712 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 PLD3Q8IV08 490 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 DHX40Q8IX18 779 aaKnown RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 GPALPP1Q8IXQ4 340 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 ANKRD13AQ8IZ07 590 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 CACNA2D3Q8IZS8 1091 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 SLC34A3Q8N130 599 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 GBGT1Q8N5D6 347 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 SLC5A8Q8N695 610 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 TMEM178AQ8NBL3 297 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 LSM14AQ8ND56 463 aaKnown RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 HMGCLL1Q8TB92 370 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 UTP15Q8TED0 518 aaKnown RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 RFT1Q96AA3 541 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 RHBDF1Q96CC6 855 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 OXNAD1Q96HP4 312 aaPredicted RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 PRAC1Q96KF2 57 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 NSMCE3Q96MG7 304 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 LINC00167Q96N53 147 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 GAL3ST4Q96RP7 486 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 USP28Q96RU2 1077 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 ACOX2Q99424 681 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 PCGF1Q9BSM1 259 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 FAM167BQ9BTA0 163 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 CLEC7AQ9BXN2 247 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 RTN4RQ9BZR6 473 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 TMEM39BQ9GZU3 492 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 WWTR1Q9GZV5 400 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 RANBP17Q9H2T7 1088 aaKnown RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 SEBOXQ9HB31 216 aaPredicted RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 LTB4R2Q9NPC1 389 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 ERAP1Q9NZ08 941 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 HCN3Q9P1Z3 774 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 CTNNAL1Q9UBT7 734 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 EPHA6Q9UF33 1036 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 LRWD1Q9UFC0 647 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 MUTYHQ9UIF7 546 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 A4GNTQ9UNA3 340 aa0.65□□□□□ -2.31
MECP2-221ENST00000637467 EXO1Q9UQ84 846 aaKnown RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 AAR2Q9Y312 384 aaKnown RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 LAS1LQ9Y4W2 734 aaKnown RBP0.65□□□□□ -2.31
MECP2-221ENST00000637467 YIPF1Q9Y548 306 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms