RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 ZNF544Q6NX49 715 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 SHISA2Q6UWI4 295 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 SLC16A12Q6ZSM3 486 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 LUZP2Q86TE4 346 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 CREG2Q8IUH2 290 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 NUDCD3Q8IVD9 361 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 ANKRD35Q8N283 1001 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 TMEM130Q8N3G9 435 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 GALNT4Q8N4A0 578 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 KCTD13Q8WZ19 329 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 SYN2Q92777 582 aaPredicted RBP8.28□□□□□ -1.08
SMN2-214ENST00000626847 GLG1Q92896 1179 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 TCEAL3Q969E4 200 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 MTMR8Q96EF0 704 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 ZNF845Q96IR2 970 aaPredicted RBP8.28□□□□□ -1.08
SMN2-214ENST00000626847 TGS1Q96RS0 853 aaKnown RBP8.28□□□□□ -1.08
SMN2-214ENST00000626847 CCNL2Q96S94 520 aaPredicted RBP8.28□□□□□ -1.08
SMN2-214ENST00000626847 NFKBIZQ9BYH8 718 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 CEP41Q9BYV8 373 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 FRMD8P1Q9BZ68 369 aaPredicted RBP8.28□□□□□ -1.08
SMN2-214ENST00000626847 OR51M1Q9H341 326 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 GSX1Q9H4S2 264 aaPredicted RBP8.28□□□□□ -1.08
SMN2-214ENST00000626847 GAREM1Q9H706 876 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 SMYD3Q9H7B4 428 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 AKTIPQ9H8T0 292 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 C1orf112Q9NSG2 853 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 SACM1LQ9NTJ5 587 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 COA4Q9NYJ1 87 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 VPS54Q9P1Q0 977 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 ASH2LQ9UBL3 628 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 AFF4Q9UHB7 1163 aaKnown RBP8.28□□□□□ -1.08
SMN2-214ENST00000626847 FBXL21Q9UKT6 434 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 PCDHA7Q9UN72 937 aa8.28□□□□□ -1.08
SMN2-214ENST00000626847 CHD8Q9HCK8 2581 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 A0A1W2PRG0 241 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 CLDN25C9JDP6 229 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 CES2O00748 559 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 TSPAN4O14817 238 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 SYN3O14994 580 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 EIF1BO60739 113 aaKnown RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 ZNF623O75123 536 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 TRIM3O75382 744 aaPredicted RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 HSPA4LO95757 839 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 DNTTP04053 509 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 ATP1A1P05023 1023 aaKnown RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 EPHX1P07099 455 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 RBP1P09455 135 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 CETPP11597 493 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 CKMT2P17540 419 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 TGM1P22735 817 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 POU1F1P28069 291 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 EPHB2P29323 1055 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 EIF1P41567 113 aaKnown RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 LEPRP48357 1165 aaKnown RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 CDKN1CP49918 316 aaPredicted RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 SERPINH1P50454 418 aaKnown RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 TAS2R60P59551 318 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 MYBPC1Q00872 1141 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 KCNC3Q14003 757 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 VGLL4Q14135 290 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 TYSND1Q2T9J0 566 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 TKFCQ3LXA3 575 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 DPCR1Q3MIW9 517 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 MARCH8Q5T0T0 291 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 LIN9Q5TKA1 542 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 STRIP1Q5VSL9 837 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 RSBN1Q5VWQ0 802 aaPredicted RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 AFMIDQ63HM1 303 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 OGFOD2Q6N063 350 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 WDR73Q6P4I2 378 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 BHLHB9Q6PI77 547 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 SUSD1Q6UWL2 747 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 PDZD4Q76G19 769 aaPredicted RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 FAM122BQ7Z309 247 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 PLCZ1Q86YW0 608 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 ARMC8Q8IUR7 673 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 C10orf53Q8N6V4 93 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 FAM71DQ8N9W8 422 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 HIPK4Q8NE63 616 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 GSTCDQ8NEC7 633 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 PNPT1Q8TCS8 783 aaKnown RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 ZNF384Q8TF68 577 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 DNAJA4Q8WW22 397 aaPredicted RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 CKAP2Q8WWK9 683 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 SEC14L1Q92503 715 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 LURAP1Q96LR2 239 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 PPP1R2P1Q96PQ5 205 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 STRBPQ96SI9 672 aaKnown RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 TMEM246Q9BRR3 403 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 CHID1Q9BWS9 393 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 ROPN1BQ9BZX4 212 aaPredicted RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 C2orf40Q9H1Z8 148 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 EBF3Q9H4W6 596 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 ROPN1Q9HAT0 212 aaPredicted RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 TOPORSQ9NS56 1045 aaPredicted RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 GDE1Q9NZC3 331 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 PSMC3IPQ9P2W1 217 aaPredicted RBP8.27□□□□□ -1.09
SMN2-214ENST00000626847 BCAP29Q9UHQ4 241 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 PCDHGA1Q9Y5H4 931 aa8.27□□□□□ -1.09
SMN2-214ENST00000626847 PFASO15067 1338 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms