RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 GPR12P47775 334 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 AVPR1BP47901 424 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 HNMTP50135 292 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 GPC3P51654 580 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 TUBB4BP68371 445 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 TFAP4Q01664 338 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 TYSND1Q2T9J0 566 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 SMTNL2Q2TAL5 461 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 TMEM63BQ5T3F8 832 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 PAPD7Q5XG87 772 aaKnown RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 B3GNT6Q6ZMB0 384 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 ATG9AQ7Z3C6 839 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 FAM219AQ8IW50 185 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 MB21D2Q8IYB1 491 aaPredicted RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 SIX6OS1Q8N1H7 587 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 C8orf58Q8NAV2 365 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 MCUQ8NE86 351 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 HMGCLL1Q8TB92 370 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 SETD6Q8TBK2 473 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 ANP32BQ92688 251 aaKnown RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 TMEM18Q96B42 140 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 HDAC11Q96DB2 347 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 CLMNQ96JQ2 1002 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 RAB3IPQ96QF0 476 aaPredicted RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 ATP6V0BQ99437 205 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 TIMP4Q99727 224 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 CRACR2AQ9BSW2 395 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 ACPTQ9BZG2 426 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 RWDD1Q9H446 243 aaPredicted RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 HINT3Q9NQE9 182 aaKnown RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 TSPYL4Q9UJ04 414 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 PTBP2Q9UKA9 531 aaKnown RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 PCDHGA1Q9Y5H4 931 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 AP1M2Q9Y6Q5 423 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 LOC100509620A0A075B734 347 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 SYNJ2BP-COX16A0A087WUM0 186 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 TRBV5-3A0A0A0MS03 114 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 ARPC4-TTLL3A0A0A6YYG9 625 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 VWA5AO00534 786 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 NDC80O14777 642 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 PRPF4O43172 522 aaKnown RBP eCLIP3.81□□□□□ -1.8
LRRC39-204ENST00000620882 PRPSAP2O60256 369 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 SEC22BO75396 215 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 GPC4O75487 556 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 DAB1O75553 588 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 ADCY5O95622 1261 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 CYP1A2P05177 515 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 FAM58BPP0C7Q3 252 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 PDHBP11177 359 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 ACTN1P12814 892 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 PDGFRAP16234 1089 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 GABRA5P31644 462 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 KRT2P35908 639 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 RAB28P51157 221 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 SREBF2Q12772 1141 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 MEP1BQ16820 701 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 LBHQ53QV2 105 aaPredicted RBP3.81□□□□□ -1.8
LRRC39-204ENST00000620882 ZNF782Q6ZMW2 699 aaPredicted RBP3.81□□□□□ -1.8
LRRC39-204ENST00000620882 ZNF66Q6ZN08 573 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 TRILQ7L0X0 811 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 GRASPQ7Z6J2 395 aaPredicted RBP3.81□□□□□ -1.8
LRRC39-204ENST00000620882 TMC8Q8IU68 726 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 ARID3BQ8IVW6 561 aaPredicted RBP3.81□□□□□ -1.8
LRRC39-204ENST00000620882 FOXRED2Q8IWF2 684 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 SYCP3Q8IZU3 236 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 SPATA6LQ8N4H0 392 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 DRAXINQ8NBI3 349 aaPredicted RBP3.81□□□□□ -1.8
LRRC39-204ENST00000620882 WDR20Q8TBZ3 569 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 HM13Q8TCT9 377 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 SYAP1Q96A49 352 aaPredicted RBP3.81□□□□□ -1.8
LRRC39-204ENST00000620882 SARAFQ96BY9 339 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 RHBDF1Q96CC6 855 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 CDK5RAP1Q96SZ6 601 aaKnown RBP3.81□□□□□ -1.8
LRRC39-204ENST00000620882 KATNB1Q9BVA0 655 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 B3GNT4Q9C0J1 378 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 DNAI2Q9GZS0 605 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 MMP27Q9H306 513 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 KCNK15Q9H427 330 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 FZD8Q9H461 694 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 ANKZF1Q9H8Y5 726 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 MAP6D1Q9H9H5 199 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 HPS4Q9NQG7 708 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 HOMER3Q9NSC5 361 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 INTS10Q9NVR2 710 aaKnown RBP3.81□□□□□ -1.8
LRRC39-204ENST00000620882 UTP6Q9NYH9 597 aaKnown RBP3.81□□□□□ -1.8
LRRC39-204ENST00000620882 C6orf203Q9P0P8 240 aaPredicted RBP3.81□□□□□ -1.8
LRRC39-204ENST00000620882 FAM153AQ9UHL3 310 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 MOSPD1Q9UJG1 213 aa3.81□□□□□ -1.8
LRRC39-204ENST00000620882 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.81□□□□□ -1.8
LRRC39-204ENST00000620882 C17orf102A2RUQ5 167 aa3.8□□□□□ -1.8
LRRC39-204ENST00000620882 DPPA5A6NC42 116 aa3.8□□□□□ -1.8
LRRC39-204ENST00000620882 TMEM8BA6NDV4 472 aa3.8□□□□□ -1.8
LRRC39-204ENST00000620882 KDM4EB2RXH2 506 aaPredicted RBP3.8□□□□□ -1.8
LRRC39-204ENST00000620882 NPIPB8E9PQR5 432 aa3.8□□□□□ -1.8
LRRC39-204ENST00000620882 TRIM77I1YAP6 450 aa3.8□□□□□ -1.8
LRRC39-204ENST00000620882 UBXN8O00124 270 aa3.8□□□□□ -1.8
LRRC39-204ENST00000620882 TIMM23O14925 209 aa3.8□□□□□ -1.8
LRRC39-204ENST00000620882 ZBTB14O43829 449 aa3.8□□□□□ -1.8
LRRC39-204ENST00000620882 GCNT3O95395 438 aa3.8□□□□□ -1.8
LRRC39-204ENST00000620882 OLFM2O95897 454 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms