RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 TAS2R41P59536 307 aa10.58□□□□□ -0.72
CLTCL1-209ENST00000617103 PABPC1LQ4VXU2 614 aaKnown RBP10.58□□□□□ -0.72
CLTCL1-209ENST00000617103 NIPAL1Q6NVV3 410 aa10.58□□□□□ -0.72
CLTCL1-209ENST00000617103 TP53INP1Q96A56 240 aa10.58□□□□□ -0.72
CLTCL1-209ENST00000617103 P2RX7Q99572 595 aaKnown RBP10.58□□□□□ -0.72
CLTCL1-209ENST00000617103 KCNS3Q9BQ31 491 aa10.58□□□□□ -0.72
CLTCL1-209ENST00000617103 CNPPD1Q9BV87 410 aa10.58□□□□□ -0.72
CLTCL1-209ENST00000617103 DNMT3LQ9UJW3 386 aa10.58□□□□□ -0.72
CLTCL1-209ENST00000617103 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 PRAMEF33A0A0G2JMD5 474 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 KLHL33A6NCF5 533 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 ZW10O43264 779 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 PRAMEF10O60809 474 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 ATN1P54259 1190 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNHIT3Q15649 155 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 DCAF12L1Q5VU92 463 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 TOP6BLQ8N6T0 577 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 LRRC3Q9BY71 257 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 ZDHHC6Q9H6R6 413 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 TAS2R7Q9NYW3 318 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 IGSF9Q9P2J2 1179 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 SEC14L3Q9UDX4 400 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 PCDHB9Q9Y5E1 797 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 TRPV2Q9Y5S1 764 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 FAM25EA8MYX2 175 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 PAGE1O75459 146 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 ERAL1O75616 437 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 IFNGP01579 166 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 PSEN2P49810 448 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 MANFP55145 182 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 TAS2R39P59534 338 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 AP3S2P59780 193 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 EN1Q05925 392 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 C6orf183Q5T699 404 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 TMEM198Q66K66 360 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNF557Q8N988 423 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 OR4K2Q8NGD2 314 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 CSGALNACT1Q8TDX6 532 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 NSMCE3Q96MG7 304 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 GPR21Q99679 349 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 TCF25Q9BQ70 676 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 C1QTNF1Q9BXJ1 281 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 DSN1Q9H410 356 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 TMPRSS4Q9NRS4 437 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 NUDT4Q9NZJ9 180 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 GULP1Q9UBP9 304 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 TMED5Q9Y3A6 229 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 NID2Q14112 1375 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 CXCL11O14625 94 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 NOBOXO60393 691 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 REM1O75628 298 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 YES1P07947 543 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 ENO2P09104 434 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 SNHG28P0DPA3 235 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 PTPRAP18433 802 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 PAX3P23760 479 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 EEFSECP57772 596 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 SGCGQ13326 291 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 COLEC12Q5KU26 742 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 HECTD3Q5T447 861 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 TUBA3EQ6PEY2 450 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 RHBDF2Q6PJF5 856 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 UBE2R2Q712K3 238 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 GLB1L3Q8NCI6 653 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 OR52J3Q8NH60 311 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 C12orf43Q96C57 262 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 HAVCR1Q96D42 359 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 SLC22A4Q9H015 551 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 BRD9Q9H8M2 597 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 MST1RQ04912 1400 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 CCNCP24863 283 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 NMBRP28336 390 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 ABRQ12979 859 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 SFT2D3Q587I9 215 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 DOK6Q6PKX4 331 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 KLHL24Q6TFL4 600 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 STX12Q86Y82 276 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 STYXQ8WUJ0 223 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 AZIN2Q96A70 460 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 PKP2Q99959 881 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 TRIT1Q9H3H1 467 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 GIT1Q9Y2X7 761 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 DERAQ9Y315 318 aa10.57□□□□□ -0.72
CLTCL1-209ENST00000617103 CHURC1-FNTBB4DL54 471 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 PPP1R11O60927 126 aaPredicted RBP10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 PRLP01236 227 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 FGBP02675 491 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 CDH4P55283 916 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 ARF5P84085 180 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 MVKQ03426 396 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 MADCAM1Q13477 382 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 RNASE12Q5GAN4 147 aaKnown RBP10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 DCST1Q5T197 706 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 GCNT6Q5T4J0 391 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNF697Q5TEC3 545 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 ESRP1Q6NXG1 681 aaKnown RBP10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 USP30Q70CQ3 517 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 METTL3Q86U44 580 aaKnown RBP10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 TBATAQ96M53 351 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms